Bacillus sp. Y1: DOE78_03575
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Entry
DOE78_03575 CDS
T05922
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bacq03009
]
DOE78_03575
Enzymes [BR:
bacq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DOE78_03575
Ribosome biogenesis [BR:
bacq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DOE78_03575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_32
PrmA
TehB
Methyltransf_11
Ubie_methyltran
UPF0020
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AYA74605
LinkDB
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Position
713747..715129
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AA seq
460 aa
AA seq
DB search
MKQEQSVRITEKQTFPLTIKRLGINGEGVGYFKKQVVFVPGALPGEEVVVEATKVQPKFA
EARIKKIRKKSEHRVAPPCPVYEECGGCQLQHLDYRQQLVEKRDIVKQSLERHTKLNVEK
LDIRDTLGMENPWNYRNKSQFQVGQRDGNLLAGLYGINSHKLVDIQHCAVQHSATNKATS
TVKKILQDLKVSVYNEKTRKGVVRTIVARIGVKTEELQIVLITSQRELPHKDEIVARIKQ
ALPEVTSIVQNVNGQKTSLIFGDETRLLEGREFIQETLGELEFELSARTFFQLNPEQTVN
LYNEVKEAAALTGVEKVVDAYCGVGTIGLWLADGADEIRGMDVIADSIEDAEKNAERHGI
SHATYVVGKAEQVLPKWAKEGWKPDVLVVDPPRTGLDQQLLNTILKVKPKKIVYVSCNPS
TLAKDISVLVSKYKVGYIQPVDMFPQTSHIESVTSLILKG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggagcaatctgtaagaataactgaaaaacaaacctttccactgacaattaag
agactcggtatcaatggggaaggagtaggctactttaaaaagcaagtcgtattcgtacca
ggtgctctgccaggtgaagaagtagtggtcgaagcaacaaaagttcaaccgaaattcgcc
gaagcgcgtatcaaaaaaatacgaaaaaaatcagaacatcgtgttgcaccaccatgtcct
gtgtacgaggagtgtggaggctgtcagctccagcatctagactatcgtcaacagcttgtg
gaaaaaagggatatcgtgaagcaatcacttgagcgtcatacaaagctaaatgttgaaaag
ttagatatccgtgacacacttggcatggagaacccatggaactaccgaaacaaaagccag
ttccaggtggggcagcgtgacggtaatttactagccggattatatggcatcaactcacac
aagcttgttgatattcaacactgtgcggtacagcattccgctacaaacaaggcaacatca
accgtgaaaaagattttacaagatcttaaagtgtctgtatataatgagaaaacgcgcaaa
ggtgtcgtacgtaccattgttgctcgaattggtgtgaaaacagaggaactacaaatcgtt
ttaatcacaagccaacgcgagcttcctcacaaggacgaaatcgttgctcgcatcaagcaa
gctttgccagaagtaacatccattgtgcaaaacgtaaatggacaaaaaacatcgctgatc
tttggtgatgaaactagactattagagggaagagagttcatccaagaaactctaggagaa
ctcgaatttgagctatcagcaagaacgttcttccagctaaatcctgagcaaaccgtgaac
ctttacaatgaggtaaaagaagcagcagcactaacaggtgtggaaaaagttgtggatgct
tactgtggagtgggaaccatcggtctatggctagcagatggagcagatgaaatccgtgga
atggatgttatcgcagattcgattgaagatgcagaaaaaaatgccgagagacatggaatc
agtcacgctacttatgttgtcggtaaagccgaacaagtcctaccgaaatgggcaaaagaa
ggatggaaaccggatgtacttgtagtggatccaccaagaacaggcttggatcaacagtta
ttaaacacgattctaaaggtaaagccaaagaaaattgtgtatgtttcatgtaatccatcc
acactcgcaaaggatatctccgtgttggtttcaaaatataaggttggttatattcaacct
gtggatatgttcccacaaacaagccacattgaaagtgttactagtttaatcttaaaggga
taa
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