Bacillus sp. Y1: DOE78_05860
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Entry
DOE78_05860 CDS
T05922
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacq03019
]
DOE78_05860
Messenger RNA biogenesis [BR:
bacq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DOE78_05860
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AYA74986
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Position
1197179..1198123
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AA seq
314 aa
AA seq
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MSKGILDYEVGEAIEQFLLIKNSVKGIASNGKPFLTIIFQDQSGEIEAKLWDASDEDEKI
YAAQKIVRIVGEIQNYRGRNQLKLRQIRPAAPTDSVKLADFLETAPVSKDEMSSKITQYI
FEMKNPNIQRITRHLLKKHLNEFLEYPAATKNHHEFVSGLAYHVVSMLDLAKAIAELYPS
LDKDLLYAGIILHDLGKVTELSGPISTSYTVEGNLLGHISIMVNEIGKAADELHIAGEEV
VILQHLVLSHHGKAEWGSPKPPLIKEAEILHYIDNLDAKMNMLDRALERVKPGEFTERIF
PLEQRSFYKPTFHK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtatccttgattatgaagtaggagaagctattgaacagtttctcctaata
aaaaattctgtaaaagggatcgctagtaatggtaagccctttttaacgattattttccaa
gatcaaagtggggaaatagaagcgaaactttgggatgcatctgatgaagatgagaaaata
tatgcagcacaaaaaatagtgagaatcgttggggaaatacagaactaccgtggacgtaat
caattaaagctaagacaaatccgacctgcagctcccacagattcagtgaagttagctgac
ttccttgaaacagcacctgttagtaaggatgaaatgtctagtaaaattacacaatatatt
tttgaaatgaaaaaccctaatatccagagaattacaaggcatttattaaagaaacatttg
aatgagtttttagagtatccagctgcaacaaaaaaccaccatgagtttgtttcaggacta
gcttaccatgtagttagtatgcttgacttagctaaggcaatagctgagctataccctagc
ttggataaagatttattatacgctggaatcattcttcatgacttagggaaagtaacggaa
ctatctggaccgatttcgacttcatataccgtcgaaggcaatcttttaggtcatatctct
attatggtgaacgaaattggtaaagcggcagatgagcttcatattgctggtgaagaagtc
gttatcctccagcatcttgtattgagccatcatgggaaggctgagtgggggagtccaaaa
ccaccattaattaaagaagcagaaatacttcattatattgataatttagatgcaaaaatg
aatatgctagaccgtgcattagagagagtgaaacctggtgagtttaccgaaagaattttc
cctctagagcaaaggtcattttataagccaacttttcataaataa
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