Bacillus sp. Y1: DOE78_06755
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Entry
DOE78_06755 CDS
T05922
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03420
Nucleotide excision repair
bacq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DOE78_06755
03430 Mismatch repair
DOE78_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_06755
Enzymes [BR:
bacq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE78_06755
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOE78_06755
MMR (mismatch excision repair)
Other MMR factors
DOE78_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
CoiA
DEAD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AYA75152
LinkDB
All DBs
Position
complement(1372979..1375267)
Genome browser
AA seq
762 aa
AA seq
DB search
MKIAMKNNEKVNLHTLDRESYQFVYDEAKKGKLYCPTCKEQVRLYLGIQEEPYFYHMLRK
HSDCKDLDIESADMNKEAIEYVERNGFRIPVTRMIVSPSKQHTFQPSIHVKASPSFQPTV
RQETNITSHYIKRLFNNGFQLDDQQIKAVTTVNGSVLVVAGAGSGKTRVLTTRAAYMLYE
LKIDPKSIMLVTFTAKAATEMKERLIQYPLLSSTDINRLLTGTFHSIFYRILAYHDPVRW
HPSKLIKKDWQKDQILKEGGKAISLDEKEFAYDLALQQIGYWKNTFLLPKDVQTASRWEE
QVLHLYKYYETEKEKKNLFDFDDMLIGCYKYLTNHPDVLEMYQNRFQYFLIDEFQDINKV
QYELIKLLSRKTENLFAVGDDDQSIYAFRGSDPNYLLSFEKDFPNSKMIILNENYRSSHE
IISTANRIIEKNTARRQKTMQAQYQHSLSPLLFYPFDEEEEATMIVQDIHEKLQNGYVPN
DIAILYRTNTGSRAIFERLATTSFPFRIDLDSENFYERYLVKSMLSFLRLIINEEDQHAI
SQILPILFIRQSVMTDLKANSILNDCTMLECLSNLTTGHAFQERKLKKLLPSIRSLKGST
PLECIEFIEKEVGFGDYLKKRGNEGNSLEKGSDDIRDLKVAAKNFQTITDFLDHTKHMSA
MNKEIKQLSKQLEQAITLSTIHRAKGLEYRVVYILDVVDGGIPHDYALDSLRNGESAPIE
EERRLLYVAITRAREECYIAIPHKRRGKNAKPSRFLAPILPK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctatgaaaaataatgaaaaagttaatttgcacactttagatagagagagc
tatcaatttgtatatgatgaagctaaaaaaggaaaactttattgtcctacttgtaaagaa
caggtccgtctgtatttaggaatacaagaggagccctatttttatcatatgctacggaag
cactcggattgcaaagatttagatatcgaatccgctgatatgaataaagaagctatcgaa
tatgttgaacgaaatggcttcagaataccagttacacgtatgattgtctcaccatccaaa
cagcatacgtttcagccatcaatacatgtaaaagcttctccctcctttcaaccaaccgtt
cgtcaagaaacaaacataacctcacactatataaaacgattattcaacaacggtttccaa
cttgatgatcaacaaataaaggcagtcacaacggtaaacggttctgtcctagttgttgct
ggtgctggtagtggtaagacaagagtgttgactacaagagctgcatatatgctttatgag
ctaaaaatagatccaaaatctattatgcttgttacgtttacagcgaaagcagccactgaa
atgaaagaaaggcttatccaatatcctctcctttcatctacagacatcaataggctgtta
actggaacatttcatagtatattttatagaatactagcttaccatgatccagttagatgg
catccatctaaactgataaaaaaggattggcaaaaggaccaaatactcaaagaaggtgga
aaagcaatatcacttgatgagaaggaatttgcatacgatttagctttacaacaaattggg
tattggaaaaatacgtttcttcttccaaaggatgtacaaacagctagtcgttgggaggag
caagtgttgcatttatataaatattatgaaactgaaaaggaaaagaagaacctatttgac
tttgatgatatgctcatcggatgctataaatatttaaccaatcatccagatgttttagaa
atgtaccaaaatcggtttcaatactttttaattgatgagttccaagatattaacaaagtt
caatatgagctgattaaattgctatctcggaaaaccgaaaacttatttgccgtaggagat
gacgatcaatctatttatgcatttcgaggtagtgatcctaattaccttctatcttttgaa
aaagattttccaaatagtaaaatgattatcctaaacgaaaattaccgttcctcacatgag
attatttcaactgccaaccggataatcgaaaaaaatacagctcgaagacaaaaaaccatg
caagctcaatatcaacattctctttcacctttgttgttttatccctttgatgaagaagag
gaagcaaccatgattgttcaggatattcatgaaaaactacaaaacggttatgttccaaat
gatatcgccattttataccgtacgaatacagggagccgagcaatttttgaaagactagca
acgactagctttccttttcgaattgatctggattccgaaaacttttatgaacgttattta
gtaaaatctatgttgtcctttctacgtctaattattaatgaagaagaccagcacgcaatc
agtcagatactccctattctctttattagacaatccgttatgactgacttaaaagcaaac
agtattttgaatgattgtaccatgcttgaatgcttatccaatcttacaaccggacatgct
tttcaggaaagaaagctaaaaaagctattaccttccattagaagcttgaaaggaagcaca
ccgctagagtgcattgaatttattgaaaaggaagtaggctttggcgattatttaaaaaag
cgtggcaatgaaggaaatagtcttgaaaaaggctctgacgatattcgggatttgaaggtc
gcagctaaaaacttccaaacaattaccgatttcctagaccataccaagcatatgagtgct
atgaataaagaaataaagcaacttagtaaacagcttgaacaggcaattacgcttagtact
attcatcgagcaaaggggttagaataccgagttgtgtatattctcgatgttgttgacgga
ggaattcctcatgattacgcactagactccttgaggaatggtgaatcggcaccaattgaa
gaagaacgtcgtctactatatgtagctatcactcgtgctcgagaagaatgctatatagcg
ataccgcataagagaagaggcaaaaacgctaagccatctagatttttggctcccatcctt
cctaaataa
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