Bacillus sp. Y1: DOE78_08405
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Entry
DOE78_08405 CDS
T05922
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bacq03016
]
DOE78_08405
Enzymes [BR:
bacq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DOE78_08405
Transfer RNA biogenesis [BR:
bacq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DOE78_08405
Prokaryotic type
DOE78_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYA75461
LinkDB
All DBs
Position
1693493..1694410
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AA seq
305 aa
AA seq
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MEGILPLFKPKGMTSHDCVFKLRKILRMKRIGHTGTLDPEVEGVLPICLGRATKVAEYIT
DAGKVYEGEVTLGFATTTEDATGEVVERKVIETLITLEQIKAVLLELTGEISQTPPMFSA
VKVNGKRLYEYARKGIEVERPTRQVTIYSIELLDDREMFEGETISFRFRVACSKGTYIRT
LAVMIGERLGYPAHMSDLRRTESASFSLDDCKTLSEVEEMVNNGTILNALYPIERALIHL
PKYQISDKLVEKVKNGSVLEIPEILQDIKQPIVLETMDHKALAIYMHHPHKPNLMKPTKV
LHIEN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaagggattttaccattatttaagcctaaagggatgacatctcacgattgtgtcttt
aagcttagaaaaatactgcggatgaagaggatagggcatacaggtacacttgaccctgag
gtagagggagtcttaccgatttgcctaggacgagcaacaaaggttgcagaatacataaca
gatgcaggaaaagtatacgagggtgaagtaacgcttggctttgctacaacaaccgaggat
gctacgggtgaagtggttgaaaggaaagtcattgaaactttgattaccctcgagcaaata
aaagctgtgttattggaattgacaggtgagatttctcaaaccccacctatgttctcagcg
gtcaaggtaaatggaaaacgtttgtatgaatatgcaagaaaaggaattgaagtggaacgc
cctacaagacaggtgacaatctattcgattgagcttttagacgaccgtgaaatgtttgaa
ggagaaaccatttcttttcgatttcgtgttgcttgtagcaagggaacatatattagaacg
ttagcggttatgatcggagaacgactaggttaccctgcccatatgtctgacttaagacgc
accgagtcagcatcattttctctcgatgactgtaagacactttccgaagtagaggaaatg
gtaaacaacggaacaattttaaacgctttatatcccattgaaagagcgcttattcatttg
ccgaaatatcaaataagtgataaattagttgagaaagtgaaaaatggatctgttcttgaa
atacctgaaatactacaagatattaaacaacccattgttctcgaaacgatggatcataag
gcgctagctatatacatgcaccatcctcataagcctaatctaatgaagccaacaaaggta
ctacatatagagaattag
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