Bacillus sp. Y1: DOE78_08420
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Entry
DOE78_08420 CDS
T05922
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOE78_08420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacq03019
]
DOE78_08420 (pnp)
03016 Transfer RNA biogenesis [BR:
bacq03016
]
DOE78_08420 (pnp)
Enzymes [BR:
bacq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DOE78_08420 (pnp)
Messenger RNA biogenesis [BR:
bacq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DOE78_08420 (pnp)
Transfer RNA biogenesis [BR:
bacq03016
]
Prokaryotic type
tRNA degradation factors
DOE78_08420 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
KorB
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AYA75463
LinkDB
All DBs
Position
1695977..1698097
Genome browser
AA seq
706 aa
AA seq
DB search
MGQDKKIYSIEWAGRKLSVEIGQLAKQANGAVLVRYGDTAVLSTATASKEPKKLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSMVMSV
DQDCSSEMAAMFGSSLALSVSDIPFEGPIAGVTVGRIDGQFIINPSVAETEKSDMHLVVA
GTKDAINMVEAGAEEVPEETMLEAIMFGHEEIKRLIAFQEEIAAEIGKEKTEVNLYQLDA
ELEAEIREMCEADMIKAIQVQEKHAREDAIRAVKDTVIAKYEEEKAEDEDLKQVKQILDK
MVKGEVRRLITEEKVRPDGRNPEEIRPLSSEVALLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGIEEEKRFMHHYNFPNFSVGETGPMRGPGRREIGHGALGERALEPIIPSEK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTILT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIEGLSRQILEEALQQAKKGRMQILDSMLA
TISTPKGQLSKYAPKIITIYINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
TNEEMNQKAKKIIEDIVREVEIGQMYLGKVKRIEKFGAFVELFSGKDGLVHISELAEERV
GKVEDVVAIGDEILVKVMEIDKQGRVNLSRKVVLKEQREQKEQAQK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagacaagaaaatctattcgatagaatgggctggtcgtaagctttccgtcgaa
attgggcagcttgctaaacaagcaaacggcgctgtgctcgttcgctatggcgatacagca
gtacttagtacggctacagcatcgaaggaaccgaagaaactcgatttctttccattaaca
gtaaactatgaggagcgtctatacgcggtaggtaaaattcctggtggatttattaagcgt
gaaggacgtccgagtgaaaaagcaatactagctagccgtttaattgacagaccgattcgt
ccattgtttgctgatgggttccgtaatgaagttcaagtagttagtatggtaatgagtgtg
gatcaagactgctcatctgaaatggcagctatgtttggttcatctctggcactttctgtt
tcagatattccttttgaaggtccaattgcaggtgtaacagttggccgcattgatggtcaa
tttattattaatccttctgttgcagaaacagaaaagagcgatatgcacttagttgttgct
ggaacaaaagatgctattaacatggttgaagccggcgcagaagaagtaccagaagaaacg
atgctagaagcaataatgtttggacatgaagaaatcaagagattaatcgcattccaagaa
gaaattgctgctgaaatcgggaaagaaaagactgaagtgaatttatatcaactagatgct
gaacttgaagcggaaattcgtgaaatgtgcgaagcagacatgattaaagccattcaagtt
caagaaaagcatgctcgtgaagatgctatccgtgcggtaaaggatacggttattgcaaaa
tacgaggaagaaaaagcagaagacgaagacttaaaacaagtaaaacaaattttagataaa
atggttaaaggcgaagttcgccgtttaattacagaagaaaaggttagacctgatggccgt
aatccagaggagattcgtccgctatcatcagaggtagctctgcttcctcgtacacatggt
tctggtctgttcacacgtggacaaactcaagcattgagtatttgtacacttggggcttta
ggagatgtacaaatcctagacggactaggaatcgaagaagaaaagcggttcatgcaccac
tataacttcccgaatttctctgttggagaaactggtcctatgcgtggacctggtcgccgt
gaaattggacatggtgcgttaggtgagcgtgcattagaaccaattattccttctgaaaag
gatttcccatacacgattcgtctcgtatcagaagtgttagaatcaaacggttctacatcc
caagcaagtatatgtgcgagtactttggctatgatggacgctggtgttccaattaaagct
cctgtagctggtattgcgatgggtcttgtgaaatctggtgagcattacacaatccttact
gatatccaaggaatggaagaccatctgggcgatatggactttaaagtggctggtacgtca
aaaggtgtaacagcattacaaatggatattaaaatcgaaggcttatcaagacaaattctt
gaagaagcattgcagcaagcaaagaaaggccgtatgcaaattcttgattccatgcttgcg
acgatttcaactccgaaaggacagctttctaagtacgcaccaaagattattacaatctat
atcaaccctgataagattcgtgatgttattggaccaagcggaaagcaaatcaataagatt
attgaagaaactggcgtaaaaattgatatcgagcaagatggtacagtcttcatctcatct
actaatgaagaaatgaaccaaaaagctaagaaaatcattgaagacatcgttcgtgaagtt
gaaattggacaaatgtatttagggaaagtaaaacgaattgaaaaattcggagcatttgtt
gagctatttagcggaaaagatggattagttcacatttctgaacttgctgaagaaagagta
ggcaaagtagaagatgtagtggctattggtgatgagatcttagtgaaagttatggaaatt
gataagcaaggccgtgtaaacttgtcacgtaaagtcgttcttaaggaacaacgtgaacaa
aaagaacaagcccaaaaataa
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