Bacillus sp. Y1: DOE78_15200
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Entry
DOE78_15200 CDS
T05922
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DOE78_15200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_15200
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DOE78_15200
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Motif
Pfam:
Ku
CDC24_OB3
DUF7837
DUF6058
Prok-RING_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AYA76681
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Position
complement(3111444..3112283)
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AA seq
279 aa
AA seq
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MHTIWKGSISFGLVNIPIKLHSATEDKDIKLRTLHKKCHSPIKYEKTCPVCDEEVKQEEI
VRAYEYTKGKFVILEDEDFNKLKKENEEKAVEIIDFVKMEEIDPIYYDRSYYMSPSDGGG
KAYSLLRKALQESEKVGLAKIIIRSKEQMAVIRVYENSLVMETIHFPDEVRSAADVPNVP
AEDKVTEKELDTAIMLIDQLTTTFNPEKYTDDYRTALIELIESKRSGKEIVTPVEKEQKS
NVTDLMAALQASIDKTKPKQATTEAPKKKRTTVKTKKQA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatttggaaagggagtatcagctttgggctcgtaaatatccccatcaagctt
cattcggcaacagaagataaggatattaaacttcggacattgcacaagaaatgtcactct
ccaattaaatatgaaaaaacttgtcctgtttgcgatgaagaagtgaagcaagaggaaatt
gttcgagcatatgaatacacaaaagggaagttcgtcattcttgaagacgaggattttaat
aaattaaaaaaagagaatgaagaaaaggcagttgagattatagatttcgtaaaaatggag
gagattgatccaatctattatgatcgaagctattatatgtccccgagtgatgggggcgga
aaagcctattccttactaagaaaggcgcttcaagaatcggaaaaggttggattagcaaaa
attatcattcgatcaaaagaacagatggctgtcatacgtgtgtatgaaaattcattagta
atggaaacgatccattttccagatgaggtaagatctgctgctgatgttccaaatgttcct
gcggaagataaagtaacagaaaaagaacttgataccgcaataatgttgatcgatcaatta
actacaacgtttaatccggaaaaatatacggatgattatcgaaccgcattgatagaactg
attgaatctaagcgttcaggtaaagaaattgttacgccagtagaaaaagaacaaaagtca
aatgtcacagatttaatggctgcactacaagcgtcaatcgataaaacaaaaccgaaacaa
gcgacgacagaagctcctaagaaaaaacgaacgacagtcaaaacaaaaaaacaggcataa
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