Bacillus sp. Y1: DOE78_16260
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Entry
DOE78_16260 CDS
T05922
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOE78_16260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacq03019
]
DOE78_16260
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_16260
Enzymes [BR:
bacq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DOE78_16260
Messenger RNA biogenesis [BR:
bacq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DOE78_16260
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DOE78_16260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AYA76869
UniProt:
A0A385NT31
LinkDB
All DBs
Position
complement(3305920..3307422)
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AA seq
500 aa
AA seq
DB search
MMLEYELKTHFGYDQFKMGQKEIIEALLQGKNVLAMLPTGTGKSLCYQLPAYLMEGVVVV
VTPLLSLMQDQVEQMMARGEKRVVAINSFLEREERGNVFGRLHTYKFIYISPEMLMNEFV
VSQLNKLLISLFVVDEAHCISQWGYDFRPDYLKLGDIREILGSPRTIALTATADQEVRSD
IVRTLKLDKWEEFVSSVDRPNIKMVVDYVHDAREKLDKLLEWVSFLQGPGIIYFSSKKLA
EEVAIMLRDSGVPRAMAYHGGLDQESRILIQQQFIKGQLDVICATSAFGMGINKENVRFV
IHFHMPLQLESYLQEIGRAGRDGENSISILLYSPHDEQLPYQLAEGELPTEYQIRWLFQH
FGDQLLYEWEEMQETIQQIGGFTDNSWRLTKDFLRSLTNTMDLKIAEERFIEYVDNRKKH
KRKKILDMLNWIQSKECKRKGVLSYFGEVTHGTIDDCCSVCGIVYDRYKTKCSEVVEYSP
FQWKDYLRGLLTKSVTSYEK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggagtatgaattaaaaacacattttggatatgatcaattcaaaatgggccaa
aaagagattattgaagcgttattacaaggaaagaatgtccttgcaatgctcccaaccgga
actggtaagtcactttgttatcaactaccagcttatcttatggaaggtgtagtggtagtg
gttaccccattgctttcattgatgcaggaccaagttgaacaaatgatggcacgaggtgaa
aaacgagtagtagcgatcaattcttttctagaacgtgaggagagaggcaatgtttttggt
cgtttgcatacgtataagtttatttatatctcacctgaaatgctaatgaatgaatttgtt
gtttcacagctaaataagttactaataagcctatttgtggtagatgaggcgcattgtatt
tcgcagtggggttatgattttagacctgattatttaaagttaggtgacattcgtgaaatt
cttgggagtcctcgaacgattgctttgactgccacagcagatcaggaggttcggtccgat
attgtccgaactttaaagctagataagtgggaggaatttgtgtcctccgttgatcgtccc
aacattaaaatggtcgtagactatgtccatgatgctagggaaaagcttgataagctatta
gagtgggtatcttttttacaaggtccagggataatctatttttctagtaaaaaattagcc
gaagaagtagccattatgctacgagacagtggagttccaagagcaatggcgtaccatggt
gggcttgaccaggaaagtagaatacttattcagcagcaatttattaaagggcagcttgat
gtgatatgtgcaactagcgcttttggaatgggaatcaataaagaaaatgtgcggtttgtg
atccatttccatatgcccttacagctagaatcttacttacaggagatcggcagagcggga
agggatggagagaatagtatatccattcttttgtattctcctcatgatgagcaacttcca
taccagctagcagaaggagaacttcctacagaatatcaaattcgttggctgtttcaacat
tttggagaccaactgctttatgagtgggaagaaatgcaggaaaccattcaacagattggg
ggatttacggataattcctggagattaacaaaggattttctccgtagtctaactaacacg
atggatttaaagatagcggaagaacggtttatagaatatgttgacaatagaaaaaagcat
aaaaggaaaaagatattggacatgttgaattggattcagtcgaaggagtgtaaacgcaag
ggagttctttcttattttggagaagttactcacggcaccattgacgattgttgttctgtg
tgtggaattgtttacgatcgatacaaaaccaagtgttcagaagtagtagagtattcgcct
tttcagtggaaggattatttgaggggcttgcttacgaagagtgtgactagttatgaaaaa
taa
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