Bacillus sp. Y1: DOE78_17345
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Entry
DOE78_17345 CDS
T05922
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bacq
Bacillus sp. Y1
Pathway
bacq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DOE78_17345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacq03021
]
DOE78_17345
Transcription machinery [BR:
bacq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DOE78_17345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
NusA_N
Pox_G7
Motif
Other DBs
NCBI-ProteinID:
AYA77058
LinkDB
All DBs
Position
complement(3506035..3507159)
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AA seq
374 aa
AA seq
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MAEKSARSKEVDSDLTLEQVKDQLTEVGKKTGVLAYDDIAEKLSNFDVDSDQMDEFYEFL
GEQGVELVGESEDGDPNIQELAKGEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLSA
EEEIELANRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEK
FDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREP
TPEEIGEDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKRLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaatcggcccgttcaaaagaggttgattcagatttgaccctagaacaagta
aaagatcagttaacagaggttggaaaaaaaacaggggttctagcctatgacgatattgca
gagaaattatctaattttgatgtagactcagatcaaatggatgagttttatgaattttta
ggtgagcaaggtgttgaactagttggagagtccgaagacggagatcctaatatacaggag
cttgctaaaggtgaagaagaatttgatttaaatgatctaagcgtaccaccaggagtgaaa
atcaatgaccctgttcggatgtacttaaaagaaatcggtcgagtagacctattgtctgcc
gaagaggaaattgagctcgctaaccgtattgaacaaggtgacgaagaagcaaagcgccga
ttagcagaagcaaacctacgtcttgtggttagtattgcaaaacgttatgttggtcgcggt
atgttgttccttgatttgattcaagaaggaaacatgggattaatcaaagcggttgagaaa
tttgattatcgcaaagggtttaaattcagtacgtatgctacttggtggatacgacaagca
attactcgtgcgattgctgaccaagccagaacgattcgtatccccgttcatatggtggaa
acaataaataaactaattcgtgttcaacgtcagctacttcaggatcttggacgtgaacca
actccagaagaaattggagaagatatggacttaactcctgataaggttcgtgaaatcctg
aaaattgctcaagaaccagtttcattagaaacaccaattggtgaagaagatgactcgcat
ttaggtgatttcattgaagatcaggatgctacatcaccttcagagcatgctgcttatgag
ctgttaaaagaacagcttgaagatgttcttgatactttaaccgaccgtgaagaaaatgta
ttacgactacgttttggacttgatgatggccgtacgagaactttagaagaagttggaaaa
gtgtttggtgtcacaagagaacgtatcagacaaattgaagcaaaagcgttaaggaagtta
agacaccctagccgtagcaagcgtttgaaggatttcttagaataa
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