Bacillus sp. Y1: DOE78_18415
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Entry
DOE78_18415 CDS
T05922
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03030
DNA replication
bacq03410
Base excision repair
bacq03420
Nucleotide excision repair
bacq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOE78_18415
03410 Base excision repair
DOE78_18415
03420 Nucleotide excision repair
DOE78_18415
03440 Homologous recombination
DOE78_18415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacq03032
]
DOE78_18415
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_18415
Enzymes [BR:
bacq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOE78_18415
DNA replication proteins [BR:
bacq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DOE78_18415
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DOE78_18415
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOE78_18415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
UBA_3
XPG_I
HHH
Motif
Other DBs
NCBI-ProteinID:
AYA77259
LinkDB
All DBs
Position
complement(3721249..3723882)
Genome browser
AA seq
877 aa
AA seq
DB search
MKKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLLRILEDEKPSHIMVAFDA
GKTTFRHKTFSEYKGGRQKTPPELSEQFPFIREVLDAYRIQRYELENYEADDIIGTLSKK
AEEDGYEVKVISGDKDLTQLSSEKTTVAITKKGITEIEEYTPEHIKEKYGLTPKQIIDMK
GLMGDTSDNIPGVPGVGEKTAIKLLAEFETLEKLLESIDQVSGKKLKEKLEEFKDQAIMS
KELATITREAPVTVQIEEFEYDEFDRDKVVQLFKELGFNSLLDKLGDHTGASVEEPLESI
EFTTVHEVTEELFADENALYIEVLDDNYHYADIVGISLVNERGNFFIPTNVAMESSVFKT
WAENEASKKIVYDAKRTEVSLRHHHIHLKGIEFDLLLASYIMNPAESVDDISTTAKRYGF
TSISSDEAFYGKGAKRKIPEPEQLGEHLVRKGLVLQDLRDKLEQELKANEQFELYYDLEL
PLSLILADMESCGIKIDLDRLHAMGEAITKQLTNIEARIYDLAGESFNINSPKQLGVILF
EKLQLPVAKKTKTGYSTSADVLEKLEAEHEIIREILNYRQLGKLQSTYIEGLLKVINPST
NKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEEGWVIFAADYSQIEL
RVLAHIANDEKLIEAFQEGLDIHTKTAMDVFHVSKEEVTSNMRRHAKAVNFGIVYGISDY
GLSQSLNITRKEAGSFIERYLESYPGVKEYMEEIVKDAKQKGFVSTLLHRRRYIPEITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMIDMADRLEKEKLKSRLLLSVHDELIFEAPEE
EIERLKEIVPDVMEHTVELKVPLKVDYSYGPTWFDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaactcgtattaattgatggaaatagcattgcctaccgggcattttttgct
ctgccattgctaaacaatgataaaggaattcatacgaatgccgtttatggatttacgatg
atgctcttaaggatattggaggatgagaagccatcacatataatggttgcgtttgatgct
ggaaaaacaaccttccgccataagacatttagtgagtataagggaggacgtcaaaaaaca
cctcctgagctatccgaacaattcccttttattcgagaagtattggacgcataccgaatc
caaaggtatgaacttgaaaactatgaagcagatgatattattggtactttgtcgaagaag
gcagaagaagatggctatgaagtaaaggttatttcgggagataaagatttaacacagttg
agttctgaaaaaacgactgttgcgatcacaaaaaaagggatcacggaaattgaggaatat
actccagagcatatcaaagaaaaatatggtttaacaccaaagcagatcattgatatgaaa
gggttgatgggggatacctcagacaatattcctggtgtccctggagttggtgagaaaacc
gctattaagctattagcggagtttgagacactcgaaaaactgctcgagtcgattgaccaa
gtgagtgggaagaaattaaaagaaaagcttgaggaattcaaagaccaggccattatgagt
aaagagcttgcgaccataacgagagaagctccagttacggtacaaatcgaggaattcgaa
tatgacgaatttgaccgtgacaaggttgttcagttatttaaagaattaggatttaattca
ttgctggataaattaggggatcacacaggagcttctgtggaagaacctttagagagtatt
gaatttacaacggtccatgaagtaacggaagaactttttgcggatgaaaatgctttatac
attgaagtgttagatgataattatcattatgctgatattgtgggtatatcactagtgaat
gaaagggggaactttttcattcctaccaacgtagcaatggaatcatccgtttttaaaact
tgggctgaaaatgaagcttctaaaaaaattgtgtatgacgcgaaaaggacagaggtatct
ctaagacatcatcatatccacctaaaagggattgagtttgacttacttttagcttcttat
attatgaatccagccgagtcagttgatgatatttcaacgaccgctaaacgctatggtttt
acgagtattagttctgatgaggcgttttacggaaaaggggctaagagaaagatccctgaa
ccggaacagcttggagaacatctcgttcgaaaaggactagtgttacaagatctgcgcgat
aagctcgaacaagagttaaaagcaaatgaacaatttgaactttattatgatttagagctt
cctttatctttaattttagcggatatggaatcgtgtggaattaagattgacctcgaccga
ctccatgcgatgggagaagcaattaccaaacaactaactaatattgaagctcgtatctac
gatcttgcaggcgaaagctttaatattaattcaccaaagcagttaggcgtcattctcttt
gaaaagttacagcttccggtagcaaaaaagacaaaaactggctattctacctctgcagat
gtactggagaagcttgaagcagaacacgaaattattcgagaaatattaaactaccgtcag
cttggtaagcttcagtccacttatattgaaggattacttaaagtaattaatccttcaact
aataaagttcatacaagatttaatcaggctttaactcagacagggagattaagctctaca
gatccgaacttacaaaatatccctatacgtctagaagaaggtcgtaaaattcgtcaagcc
tttattccgtcagaggaaggctgggttatttttgcagccgattactcacaaattgaatta
cgggtgttggcgcatattgcaaatgacgaaaagctaatcgaagcctttcaagagggtcta
gacattcatacaaaaacagcgatggatgtgtttcatgtatccaaggaagaagtaacatcc
aacatgagacgacatgcaaaagcggttaactttggaattgtttacggcatcagtgattat
gggttgtcacagagcttaaatattacacgaaaagaagcaggtagctttattgaaagatac
ttagaaagttatccaggtgtgaaagaatatatggaagaaatcgtaaaagatgcaaagcaa
aagggattcgtgtcaacccttctgcatcgccgaagatatatcccggaaataacaagcagg
aacttcaaccttcgtagctttgcggaacggacggcaatgaatacgccgattcaaggaagt
gcagcggatattattaaaaaagcgatgatagatatggcggacaggctcgaaaaggagaaa
ctaaaatcacgattgttgctatctgtacatgatgaattaatattcgaagcaccagaagaa
gaaatcgagcgattgaaggaaatcgtccctgacgttatggaacatacagtggagttgaaa
gtgccacttaaggttgattattcctacggtccgacttggtttgacgcgaaataa
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