Bacillus sp. Y1: DOE78_18505
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Entry
DOE78_18505 CDS
T05922
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03030
DNA replication
bacq03430
Mismatch repair
bacq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOE78_18505
03430 Mismatch repair
DOE78_18505
03440 Homologous recombination
DOE78_18505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacq03032
]
DOE78_18505
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_18505
Enzymes [BR:
bacq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOE78_18505
DNA replication proteins [BR:
bacq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOE78_18505
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOE78_18505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AYA77275
LinkDB
All DBs
Position
complement(3742501..3745860)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSFVHLQVQSAFSLLSSTASVEQLVKGAKEKGFTMLALTDYNVMHGAVTFYKQCLKHEMK
PIIGLTVDVQSEITSNRAYPLVLLAKNQVGFQNLMKISSVVQTKSKEGIPLKWLRHYATG
LFAISPGRAGEIESYLIENNEEQAEKCVELYKHIFGEDSFYLSLQIHNVPAETSLLNKVV
ALGNFHSVPTVVTNNVRYLQQSDSFAHECLLAIKNGEKLQDDDRERLETDQYYLKTSSEM
VELFTDFPEALENTWRIAEECNVMVELHKQKLPKYPTPEGETAEGLLEKLCMKGLTERYS
HVTDSHTDRLRYELSVIKKMKFADYFLIVWDFMRFSRDQDILTGPGRGSAAGSLVSYVLY
ITDVDPLKYDLLFERFLNPERITMPDIDIDFPDHRRDEVIEYVANKYGEAHVAQIVTFGT
LAAKAALRDVGRAFGLNTKELEGLSRTVPSQLGISLKDAYAQSERLRAFVNESSTNQRLF
ETAVKLEGLPRHTSTHAAGVVISEEPLVNTVPISDGSQSVYLTQYAMDDLEEVGLLKMDF
LGLRNLSLIESIIDVIKKRARINLDIKTIPLDDQDTYSMLSRGETTGVFQLESEGMRNVL
KRLKPTNFEDIVAVNALYRPGPMENIPMFIDRKHGKEHISYLHEDLKPILENTYGIIVYQ
EQIMQIASTMAGFSLGEADLLRRAVGKKKKEILDKERQHFVEGAITKGYETSIANEVYDL
IVKFANYGFNRSHAVAYSVIAYQLAYLKAKYPVYFMAALLSSSIGNESKIAQYIKECREM
GIQILPPSINKSGYTFLVENHAIRYSLTAIKGIGVAALKGLFTARKSKKFTDLFDFCIRV
SAKSVNRKALESLIHSGSFDEFGEDRAVLLASLDVALDHAQLVNPDDAQQGDLFSDDEFF
LKPKYVNVDPIRAEDKLRQEKEALGLYLSDHPVSIYEREAKLEQAMAISTISNEGRNVRV
LVYITEMKKIRTKKGETMAFLTVSDQSGDMEAVVFPTVLKRYTILLQQGNIVIFDGKIEE
RNGGKQLVISSAKEVVKNEEAVEGKNVLYLKIQKHQEQGEFLHTLKKLLNRYSGGTPVIL
YYEETRKSIRLGKEDYVQPTTVLLSEIQSLLGSDNVILK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcaccttcaagtgcaaagtgcgtttagtttattatcaagcacagcttcc
gttgaacaattggtaaagggagcaaaagaaaagggatttacgatgctcgcattaactgat
tataatgtcatgcatggtgcagttaccttttataagcaatgcttaaagcatgagatgaaa
ccgatcattgggcttacagtggatgttcaaagtgaaataacttccaatagggcgtacccg
cttgtacttttagcaaaaaatcaagtgggtttccaaaacttaatgaaaatttctagtgtt
gtacaaacgaagtcaaaggaaggtattccattaaaatggcttagacattacgcaacggga
ttatttgcgatttctcctggccgtgcgggagaaatcgaatcgtatttaatagagaataac
gaagaacaagcagaaaaatgtgtggagttatataaacatatatttggagaagatagcttt
tatctgtccttacaaattcataacgttcctgctgaaacaagtcttttaaacaaagtcgtt
gctctagggaactttcattcggtaccaacagtcgttacaaataatgttagatatttacaa
caatctgattcatttgcccatgagtgtttgttagctataaagaatggggagaagttacag
gatgatgacagggaacgtttggagacagaccaatattatttaaaaacgagctcagagatg
gttgaactttttacagatttccctgaagcgttagaaaatacttggcgaattgctgaagaa
tgtaatgttatggttgagctacataagcaaaagcttcctaagtacccaacaccagagggg
gaaacggcagaaggattgttagaaaagctttgcatgaaaggacttactgaaaggtacagc
catgtaaccgattcacacacagatcggttacgatacgaattaagcgtaataaagaaaatg
aaatttgctgattactttttaattgtttgggattttatgaggttttcacgtgatcaggat
atattaacgggtccaggtagaggttcggcagcaggatcattggtgtcatatgtgttgtac
attacggatgtagacccgttaaaatacgatttgttatttgaaaggtttttaaatccagaa
cgtatcacaatgcctgatatcgatatcgattttccagatcatcgccgcgatgaggtgata
gagtatgttgctaacaagtacggagaagcacatgtggctcaaatcgttacttttggtacg
ttggcagcgaaagcggcccttcgtgatgttggaagagcctttggattgaatacaaaggag
ctcgaaggtctgtcaagaacggtaccttcgcaactgggaatttcattaaaagacgcctac
gctcagtcggaaaggctccgtgcatttgtcaatgaatcttctacaaaccaaagactgttt
gagacagcagtaaagttagaggggcttccaaggcacacttctacccatgcagctggggta
gtcatttctgaagaacctcttgttaacacggtccccataagtgatggcagtcaatctgta
tatctcactcagtatgcgatggatgatctggaagaggttggactattaaaaatggatttt
ctgggcttaaggaatttatctctcatagaatctattattgatgtgataaaaaagagagca
aggatcaatctcgatataaaaacgatccctttggatgatcaggatacgtattccatgtta
agtcgtggagaaacgacgggtgtgtttcaattagagtctgaagggatgagaaatgtatta
aaacggttaaagccaacaaattttgaagatattgttgcggtaaatgctttataccgtccc
ggacctatggaaaatattccgatgtttattgataggaagcatgggaaagaacatatctcg
tatttgcatgaagatttgaagccaattcttgaaaatacgtatggaatcatcgtgtatcaa
gaacaaatcatgcaaattgcttcaacgatggcgggctttagcttaggtgaggctgactta
ttgaggagagctgttggaaaaaagaaaaaagaaattcttgataaagaaagacaacatttc
gttgaaggagcaatcacaaaagggtatgagacaagcattgccaatgaggtatatgatctt
atcgtaaaatttgcaaactatggatttaacaggagccatgcggttgcatatagtgtaatt
gcgtatcaacttgcttacctaaaggcgaaatatcctgtgtattttatggcggcgttatta
tcctcaagtatagggaatgaatcaaaaattgctcaatatataaaagaatgtcgagaaatg
ggtattcaaattttgccgccatccattaacaaaagcggctataccttcttagtggaaaac
catgcgattcgatatagtcttacagccataaaggggataggtgttgctgctttaaaaggc
ttgttcactgctagaaagagtaagaaatttacggacctctttgatttttgtattcgagtg
tcagctaaatcggtgaaccgcaaggcattagaatcgctcatccattccggtagctttgat
gaattcggagaagaccgtgccgtactgttggctagccttgacgttgctttagatcatgca
cagttggtaaatccggatgacgctcagcaaggggatttattttcagatgatgaatttttc
ctaaaaccaaagtatgtaaacgttgatccgataagggctgaagataaactaagacaggaa
aaagaggcactaggcttatatctttcggaccatcccgtttcgatctatgagagagaagca
aagttggaacaagcaatggcgatttccaccatttcgaacgaaggaagaaatgtaagggtt
ttggtctatattactgaaatgaagaaaatccgtacaaaaaagggagaaaccatggctttc
ttgactgtatcggatcaaagtggtgatatggaggcggttgtgtttcctactgttcttaaa
agatatacgattctcttacaacaaggaaatattgtgatttttgacgggaagatcgaagaa
cgaaatggaggaaagcaactcgttatatcatcggctaaggaagtagttaaaaacgaagaa
gcggtggaaggtaaaaacgtactatacctaaaaatacaaaagcatcaagaacaaggtgaa
ttcttgcacacattaaagaaattgttaaacagatatagtggaggaacacctgttattctt
tactacgaagaaactaggaaaagtatcaggcttggtaaagaggattatgtacaacccaca
acggtactcttaagtgaaatccaatcgctgctaggttcagataatgtcattttgaaataa
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