Bacillus sp. Y1: DOE78_22250
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Entry
DOE78_22250 CDS
T05922
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DOE78_22250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_22250
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DOE78_22250
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DOE78_22250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UFL1
P-loop_SecA
AAA_19
AAA_30
AAA
AAA_7
HEM4
AAA_22
UB2H
AAA_16
AAA_25
PMT2_N
FlaG
Motif
Other DBs
NCBI-ProteinID:
AYA77903
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All DBs
Position
complement(4483889..4485868)
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AA seq
659 aa
AA seq
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MKDQFELVSKYSPQGDQPAAIQRIVDGIHNGEKRQTLLGATGTGKTFTISNVIKEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSSLFERKDVIIIASVSCIYGLGSPEEYRDLVLSLRTGMEIERNQLLHRLVDIQ
YERNDINFQRGTFRVRGDVVEIFPASRDEHCLRVELFGDEIDRIREVDALTGEILGEREH
VAIFPASHFVTREEKLLVAIENIEKELEERLADMRENGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLIDYFPEDFLIVVDESHVTLPQIRGMFNGDQARKQV
LVDHGFRLPSAMDNRPLTFTEFEEKINQIVFVSATPGPYELEHTPEMVQQIIRPTGLLDP
TIDVRPIEGQIDDLIGEIHERIKRNERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRLGKYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSQGHVVMYADRMTNSMELAISETKRRRAIQEEYNEKHGITPMTIQKGIRDAIRATH
AAEDEAEYKTTEKLTKLTKKERDKLIEDMEKEMKEAAKALNFERAAELRDLILELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaccaatttgaattagtctctaaatactcaccacaaggagatcagccagcagca
attcaaagaattgttgatggaatacataacggtgaaaaacgtcagacgttgctcggagca
acagggactggaaaaacattcacgatctccaatgtcattaaagaagtaaataagccgaca
cttgtgatcgctcacaataaaacgcttgctggccagctctatagcgagtttaaggagttt
tttccgaataatgccgtcgagtattttgttagttattacgattactatcagccagaagcg
tatgttccttcaacggatacatttatagaaaaagatgctagcatcaatgacgaaattgat
aagcttcgtcactcggctacatcctctttgtttgagagaaaagatgtcatcatcatcgcg
agtgtttcttgcatttacggtctcggttctcctgaggaatatcgagatcttgtgctgtca
ctaagaacagggatggaaattgaacgaaatcaactcctgcatcgcttagtagatattcaa
tatgaaagaaatgatattaattttcagcgcggaacgttccgtgttcgtggcgatgtggtc
gagattttcccggcttcacgtgatgagcattgcttgcgtgtggagctatttggtgatgaa
attgatcgcattcgagaggttgatgcattaacaggggagattcttggagaaagagaacat
gttgctattttcccagcttctcacttcgttacacgtgaagaaaagctccttgttgccatt
gaaaatatcgaaaaggagctcgaagaacgtctagcggacatgcgtgaaaacggaaagctt
cttgaggcccagcgattagagcaacgaacacgttacgatttagaaatgatgagggagatg
ggcttctgttctggaattgagaactactcccgacatctaactctaagaccacctgggtca
acaccgtatacattgatcgattattttccagaagacttcttgattgtcgtcgatgagtcg
catgtaacgttgcctcaaatacgtgggatgttcaacggggaccaagcgcgtaagcaggtt
ctcgtggatcatggattccgtttgccttcagcgatggataaccgaccgttaacgtttaca
gaatttgaggagaagatcaatcaaattgtgtttgtatcggcaacaccgggaccatatgag
cttgagcatacgccagaaatggttcaacaaatcattcgtccaacaggattgcttgatcca
acgattgacgttcgtccgattgaagggcaaattgatgacctcattggcgaaattcatgag
cggattaagaggaatgaacgcgttcttgtcacaacgttaacaaaaaagatgtccgaggat
ttaacagattacttgaaagaaattggtatcaaggtacaatatctacactctgaagtaaaa
acgctcgaaagaattgaaatcattcgtgagctacgactaggaaaatatgatgttctcata
gggattaacctgttaagagaaggacttgatattcctgaggtttcgttagtagccattttg
gatgcagacaaggaaggcttccttcgttcagaacgttcgttaatccaaaccattggtcgt
gcagcacgtaattcccaaggtcatgtggttatgtatgcggatcgaatgacaaattctatg
gagcttgcgatatcagagaccaaacgccgtcgtgccatccaagaagagtacaatgaaaag
catggtatcacaccaatgacgatccaaaaaggtattcgagatgccattcgtgcgacgcat
gcggctgaggacgaagcagagtataagacaacagaaaagcttacaaagcttacgaaaaaa
gagcgtgataagctgattgaggatatggagaaggaaatgaaagaagctgcgaaggcgcta
aacttcgagagagctgcagagcttcgcgatttaatattagagttgaaagcggaaggatga
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