Bacillus sp. Y1: DOE78_23555
Help
Entry
DOE78_23555 CDS
T05922
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03030
DNA replication
bacq03430
Mismatch repair
bacq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOE78_23555
03430 Mismatch repair
DOE78_23555
03440 Homologous recombination
DOE78_23555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacq03032
]
DOE78_23555
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_23555
Enzymes [BR:
bacq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOE78_23555
DNA replication proteins [BR:
bacq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOE78_23555
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOE78_23555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
AYA78136
LinkDB
All DBs
Position
complement(4786676..4787341)
Genome browser
AA seq
221 aa
AA seq
DB search
MFFLRKSITCPLLYQEIPLSTPLDELKFVVFDTETTGFEIATSDRLIEIGAVLIEGFKVC
EASSFQTYVNPSRQISREITELTSISNEQVTGAPYAFEAISDFFSYVREQETVSLVGHYV
SFDTLVLKNELKREKIGLKGTFTIDTLDLIGFLAPSYDMRDLERYARAFGTRIYERHNAV
GDAKTTAYLFVELIQQFRDRGYCTWGELVKATESQARFLQL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctacgaaaatcaatcacctgcccgcttctatatcaggaaataccgttatcc
actccactagatgagctgaaatttgtcgtttttgacacggaaacgacagggttcgaaata
gctacatcggacagattgatagagattggggccgttttaatagaaggttttaaggtttgt
gaggcttctagctttcaaacctatgtgaatccatctcgacaaatttctcgggaaataacg
gaattgacgtctatttctaatgaacaagtgactggagctccatatgcatttgaggccatt
tctgatttcttttcgtatgtgagagagcaggaaactgtgagtctggtcgggcattatgta
agctttgatacgcttgtgttaaaaaatgaattgaaacgagaaaagatcgggctaaagggg
acttttacaattgatacacttgatcttattggtttcctcgctccatcgtatgatatgcgc
gacctcgaacgatacgcgcgtgcgtttggaacaagaatttatgagcggcataacgcggta
ggtgatgcgaagacaacagcgtatttatttgtggagcttatccagcaatttcgcgatcgc
ggctattgtacgtggggggagcttgtgaaggcaacagagagtcaagctcggttcttacag
ctgtaa
DBGET
integrated database retrieval system