Bacillus sp. Y1: DOE78_24005
Help
Entry
DOE78_24005 CDS
T05922
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bacq
Bacillus sp. Y1
Pathway
bacq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOE78_24005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_24005
Enzymes [BR:
bacq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DOE78_24005
DNA repair and recombination proteins [BR:
bacq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DOE78_24005
Prokaryotic type
DOE78_24005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AYA78672
LinkDB
All DBs
Position
complement(4877077..4877739)
Genome browser
AA seq
220 aa
AA seq
DB search
MSNLNGWESYIGDEFKQEYFTKLDRLIEEESERYTIYPKREHIFSALQYTSYEQVKVVIL
GQDPYHGPEQAHGLSFSVLPGVPTPPSLKNIFKELQSDIGIPVPNHGYLKNWADEGVLLL
NTVLTVRAAQAHSHKKIGWEIFTDAVIKKLSEREKPMVFVLWGKPAQEKKRLISNHHFII
ESPHPSPLSAHRGFFGSRPFSKANDWLKENGYTEIDWTIK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttgaatggctgggaatcttacatcggggatgagtttaaacaggaatacttc
acaaagctcgatcgcctgattgaagaggagtctgaacggtatacaatctatccgaaaaga
gagcatatcttttctgcactacagtacacatcgtatgagcaggtgaaggtcgtcatactc
ggtcaagatccatatcatggcccagagcaagctcatggtctgagcttctcggtcctacca
ggagttcctacgcctccatcgttaaaaaatattttcaaagagttacagagtgatataggc
attcccgtaccaaaccacggatatttaaaaaattgggccgatgaaggagttctgctgtta
aacactgtcctaaccgttcgagcggcacaggctcattcccataaaaaaataggctgggaa
atctttacggatgcagtgattaaaaagcttagtgagagagagaaaccgatggtgtttgtg
ttatgggggaaaccagcacaagagaaaaagaggttgatttccaaccatcattttataatt
gaatctcctcatccaagcccgctttcagctcatcgcggcttctttgggagccgaccgttt
tcaaaagcaaatgactggctgaaggaaaatggctacacagagattgattggacaattaaa
tga
DBGET
integrated database retrieval system
