Bacillus sp. SDLI1: AUL54_00905
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Entry
AUL54_00905 CDS
T05207
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bacs
Bacillus sp. SDLI1
Pathway
bacs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUL54_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacs03019
]
AUL54_00905
03400 DNA repair and recombination proteins [BR:
bacs03400
]
AUL54_00905
Enzymes [BR:
bacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUL54_00905
Messenger RNA biogenesis [BR:
bacs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUL54_00905
DNA repair and recombination proteins [BR:
bacs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUL54_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AME04979
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All DBs
Position
142731..144509
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AA seq
592 aa
AA seq
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MLDQAESLLAHYFGYDSLRAGQKQAIQSVAEERKNTVCIMPTGGGKSICYQIPALLFEGT
TIVISPLISLMKDQVDALEEAGIAAAYINSTQTSRDIHERLNGLKEGAYRLFYITPERLT
SPEFIHILQNITVPLVAIDEAHCISQWGHDFRPSYRNIEILFNELKEPPVIIALTATATP
EVHDDICKQLHINKEQTVYTGFARENLTFKVVKGENKDRFIEQYLERNKHEAGIIYTATR
KETDRLYEKLKRSGINAGRYHGGLADDDRKDQQERFLNDQIQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLNSECVLLFSAQDIMVQRFLIDQSAAGEEKQKQDL
KKLRQMVDYCHTEDCLQRFILKYFGENEAEACGACGNCTDTRSAHDVTKEAQMVLSCIIR
MNERFGKTMVAQVLSGSKNKKVLENGFSSLSTYGIMKHQTAAEISDFIEFLISDEYIRMA
DGTFPTLMVTQKGRDVLLGKSAVARKEALQAAAVTENDELFEILRRLRKEIAAEQGVPPF
VVFSDQTLKEMSAKLPKTDHDLLSVKGVGEQKRLKYGALFLEEIRNYVRETE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcaagccgaatcccttctggcgcattattttggctacgacagccttcgcgcg
gggcaaaaacaggcgatacaatcagttgcagaggagagaaaaaacacggtctgcattatg
ccgacggggggcggaaaatcaatctgctatcagattcccgcactgctgtttgaaggaacc
acaattgttatttcccctcttatttccttaatgaaagaccaagtcgacgcgcttgaagaa
gcgggtatcgcggcagcttatattaacagcactcagacaagccgtgacattcatgagcgc
ctgaacggtttgaaggaaggggcttaccggctcttttacatcacgccggagcgtttgact
tctcctgaattcattcacatcctgcagaatattacggttcctcttgtcgccattgacgaa
gctcactgtatatcgcaatgggggcatgatttcaggccgagttaccggaatatcgaaatt
ctttttaatgaattaaaagaaccgcccgtcatcatcgcgctaacggcgacggctacgcct
gaggttcatgatgacatctgcaagcagcttcacatcaataaagaacaaactgtgtatacc
ggctttgccagagagaatttaacattcaaagtcgtaaagggcgaaaacaaagaccggttt
atcgagcagtacctcgaaagaaataaacacgaagccggcattatttatacagcaacaaga
aaagaaacggaccgtttatatgagaaattaaaacgcagcggcatcaatgccggccgttat
cacggcggattggcggatgatgacagaaaagatcagcaggagcggtttcttaacgatcag
atacaagtgatggttgctacgtccgctttcggaatgggaatcgataagagcaacatcaga
ttcgttctgcacgcgcagattccgaaagatatggagagctattaccaggaagccggacgg
gccgggcgcgacggcctcaatagcgagtgcgtgctcttgttttcggcgcaggatattatg
gtgcagcgttttttgatagatcaatcggctgccggagaagaaaaacaaaagcaggatctc
aaaaaactgaggcagatggtggattactgtcataccgaagattgcctgcagcggtttatt
ctgaaatatttcggcgagaatgaggcggaagcttgcggagcatgcggcaattgcactgat
acaagaagcgcgcatgacgtcactaaagaagcgcagatggtattgtcatgcatcatcaga
atgaatgagcgtttcggaaaaacgatggtggcgcaggtgcttagcgggtcaaaaaataaa
aaagtgctggaaaacggcttcagcagcctgtccacttacggcattatgaagcatcaaacc
gcagcggaaatcagtgattttatcgaattccttatttcagatgaatacatcagaatggca
gatgggacttttccgacgcttatggtcacccaaaaaggaagggacgttctgcttggaaag
agcgcagtcgcgagaaaagaagccttacaggccgccgccgtcaccgaaaatgatgaatta
tttgagattctccggcgtctccgcaaagagatcgcagcggaacagggcgtgcctccattt
gtcgtgttctcagatcagacgttaaaagaaatgtcggcgaaacttccgaaaacggatcat
gatcttctttctgtaaaaggggtaggggaacaaaaacgattgaaatacggagcgcttttt
ttagaagaaatccgaaattatgtaagagaaacagagtga
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