Bacillus sp. SDLI1: AUL54_02275
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Entry
AUL54_02275 CDS
T05207
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bacs
Bacillus sp. SDLI1
Pathway
bacs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUL54_02275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacs03019
]
AUL54_02275
03016 Transfer RNA biogenesis [BR:
bacs03016
]
AUL54_02275
Enzymes [BR:
bacs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AUL54_02275
Messenger RNA biogenesis [BR:
bacs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AUL54_02275
Transfer RNA biogenesis [BR:
bacs03016
]
Prokaryotic type
tRNA degradation factors
AUL54_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AME05239
LinkDB
All DBs
Position
complement(537050..539173)
Genome browser
AA seq
707 aa
AA seq
DB search
MGQEKHVFTIDWAGRQLTVETGQLAKQANGAVMVRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALCVSDIPFEGPIAGVTVGRIDGEFIINPTVDQLEKSDINLIVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKTEIALYEIDA
ELSEKVKSLAEPDLLSAIQVHEKHAREDAISKVKDAVVAKFEEEEHDEDTIKKVKQTLSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPNEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEYYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLS
TLGESRKELSQYAPKILTMTINPDKIRDVIGPSGKQINKIIEDTGVKIDIEQDGTIFISS
TDESSNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEQEQQQS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagagaaacatgtctttaccatagattgggccggcagacagcttacagtagaa
accggccagcttgccaaacaggcaaacggcgctgttatggtccgctacggcgataccgca
gtgctcagcacagcaaccgcatcaaaagaaccgaaaccgctagattttttcccgcttacc
gttaattatgaagaaagattatacgcagtcggtaaaattccgggcggctttattaaaaga
gaaggccgtccgagtgaaaaggccgttttagccagccgtctgattgaccgcccgatccgc
ccgcttttcgcagacggattccgtaacgaagtacaggtcatcagcattgtcatgagtgtc
gatcaaaactgctcatctgaaatggctgcaatgttcggctcatcacttgctctttgcgtt
tccgatattccgtttgaaggcccgattgcgggtgtgacggtaggccgcattgacggggag
ttcatcatcaatccgacggttgaccagcttgaaaaaagtgatattaaccttatcgtcgca
ggcacaaaagacgccatcaacatggtggaagcgggagcggatgaagttcctgaggaaatc
atgcttgaagcgattatgttcggccacgaagaaattaagcgcctgatcgctttccaagaa
gaaattgttgcggcagtcggcaaagaaaaaacggaaatcgcactgtatgaaattgacgca
gagctcagcgaaaaagtaaaaagtcttgcggagccggatctgctcagcgccattcaagtt
catgaaaagcatgcgcgcgaagatgcgatcagtaaagtgaaagatgcagtcgtcgcgaaa
tttgaagaagaagagcacgatgaagatacgatcaaaaaagtgaaacagacactgtctaaa
cttgtgaaaaacgaagtgcgccgtttgatcacagaagaaaaagtccgtcctgacggccgc
ggcgtcgatcaaatccgcccgctttcttcagaagtcggccttctgccgagaacgcatggc
tcagggctgtttacgagaggacagacccaggcgctcagcgtatgtacattaggcgctctt
ggcgacgttcagattcttgacggtttaggcgtggaagaatcaaaacggtttatgcatcat
tataacttcccgcaattcagcgtaggggagacaggcccgatgcgcggaccgggacgccgt
gagatcggtcacggggctcttggagagcgtgcgcttgagccggtcattccgaatgaaaaa
gacttcccgtatacggttcgcctcgtatccgaagtgcttgaatcaaacggttccacttca
caggccagcatttgcgcgagcacgcttgccatgatggacgccggtgttccgattaaagcg
cctgttgcaggtatcgcaatgggacttgtgaaatcaggcgagtactacacagtattaacg
gatattcaaggaatggaagatgccctcggtgacatggactttaaagtagccggtacggaa
aaaggcgtaacagcgctgcaaatggacattaaaatcgaaggcctttcaagagaaatcctt
gaagaagcgcttcagcaggcgaaaaaaggaagaatggaaatcctgaacagcatgctcagc
acgcttggtgaatcaagaaaagaactttctcaatatgcaccgaaaattttaacgatgaca
atcaatccggataaaatccgtgacgttatcgggccgagcggcaaacaaatcaacaaaatc
attgaagataccggtgttaaaattgacattgaacaagacggcaccatctttatttcttct
actgatgaaagcagcaaccaaaaagcgaaaaaaatcatcgaagatcttgtcagagaagtc
gaagtcggccagctttacctcggtaaagtcaaacggattgaaaaattcggcgctttcgtt
gaaatcttcagcggaaaagacggtctcgttcacatctctgaacttgcgctcgaacgggtc
ggcaaggttgaggatgttgtgaaaatcggtgacgaaatccttgtgaaggtaacggaaatt
gacaaacagggacgtgtcaacctgtcgcgtaaagcagtactgcgcgaagagaaagaaaaa
gagcaggaacaacaacaatcttaa
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