Bacillus sp. SDLI1: AUL54_08410
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Entry
AUL54_08410 CDS
T05207
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bacs
Bacillus sp. SDLI1
Pathway
bacs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUL54_08410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacs03019
]
AUL54_08410
03009 Ribosome biogenesis [BR:
bacs03009
]
AUL54_08410
Enzymes [BR:
bacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AUL54_08410
Messenger RNA biogenesis [BR:
bacs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUL54_08410
Ribosome biogenesis [BR:
bacs03009
]
Prokaryotic type
rRNA helicases
AUL54_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AME06365
LinkDB
All DBs
Position
complement(1773707..1775194)
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AA seq
495 aa
AA seq
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MTITFQDFQLSSDLMKSINRMGFEEATPIQAQTIPLGLLNKDVIGQAQTGTGKTAAFGIP
LVEKMNPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPHIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTL
LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT
KRKMDRMKEPTLDEALEGQQQVTVDRLRTAISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMATKEPDSTPVRLTDEAPMVSKRYKNQRTSKRRDGQGGGYRGGKGKNNSRSSYDKKRST
DRRSSSSDRRQKKSY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagatttccaattaagttctgatctcatgaagtcaatcaatcgt
atgggatttgaagaagcaacaccaattcaggcacaaacgattccgctcggacttttaaat
aaagatgtcatcggacaagcgcaaacaggtacaggtaaaacagctgcgttcggtataccc
cttgttgaaaaaatgaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacc
cgtgaattagccattcaagtatctgaagagttatataaaatcggacaagataagcgtgcg
aaagtgctgcctatttacggcggccaggatatcgggcgtcaaatccgcgcattgaagaaa
aacccgcatatcatcgtaggtacgccgggacgtcttcttgaccatatcaaccgccgcacg
atccgtcttaacaacgtgaatacggttgtcatggatgaggccgacgaaatgctgaacatg
ggattcattgatgatatcgaatcaattctctcaaacgtgccgagcgagcaccaaacgctt
ctattctcagcaacaatgcctgcgccgatcaaacggatcgcagagcgtttcatgactgag
ccggagcatgtaaaagtaaaagcgaaagaaatgactgtttccaacattcagcagttctac
ttggaagtgcaagagcgtaaaaagttcgacacgctgactcgtcttcttgacattcagtct
ccggaacttgcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagcc
ctgaacctgcgcggatatgcagctgaaggaattcacggcgacttaacgcaggcgaaacgt
atggttgcgcttcgtaaatttaaagaaggtgcaatcgaagtgcttgtagcgactgacgtt
gcagcccgcggacttgatatctcaggcgtaacacacgtgtacaactttgacgtgcctcaa
gatcctgaaagctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacgggtatg
gcgatgacgtttatcacaccgcgtgagaaaagcatgcttcgcgcgattgaacaaacgaca
aaacgcaaaatggaccgcatgaaagagccgacgcttgacgaagcattagaaggtcagcag
caggtgacggttgaccgtctgcgcacggcgatcagcgaaaacaacctgaacttctacatg
acggcagctgcggaattgttagaagatcatgatgcagtgacagttgtggctgcagccatc
aaaatggcgacaaaagagccggacagcacgcctgtacgcctcactgatgaagcgccgatg
gtcagcaaacgctataaaaaccagcgtacttctaagcgcagagacggccaaggcggcggc
taccgcggcggcaaagggaaaaacaacagccgttcttcctacgataaaaaacgttcaact
gaccgccgttcatcttcaagtgacagacgccagaaaaaatcatactaa
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