Bacillus sp. SDLI1: AUL54_16165
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Entry
AUL54_16165 CDS
T05207
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bacs
Bacillus sp. SDLI1
Brite
KEGG Orthology (KO) [BR:
bacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bacs03016
]
AUL54_16165
Enzymes [BR:
bacs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AUL54_16165
Transfer RNA biogenesis [BR:
bacs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AUL54_16165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AME07742
LinkDB
All DBs
Position
3298594..3299145
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AA seq
183 aa
AA seq
DB search
MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWVHPHDYHITLIFLGAADEDRLAK
LSSLLADAASAAQPFTVQFQHLDIFGDRRQPRVLHLEPERNELLFDLREKTKQAVLKVGF
QVEKRPYHPHMTMARKWAGDQPFPDDVPFESGRVQSAVSRFSLFQTHLDRSPKYEEIAQF
QLT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcattgccgcattattttatcggcattccgattccggctgacattgctgaa
ccgatttgggaagcagccaaaaaggagccggcgttatcattcaaaaaatgggtgcacccg
catgactatcatattacgctcatttttctaggagccgcggatgaagaccggcttgcgaaa
ttatcgtctcttctcgcagatgcggcgtcggcagcgcagccgtttaccgtacagtttcag
catctggatattttcggcgaccgcagacagccgagagtgcttcaccttgagcccgaacgg
aatgaactgctctttgatttgcgggaaaaaacaaaacaggctgttttgaaagtcggtttt
caagtggaaaaacggccgtatcaccctcatatgacgatggcgcggaagtgggcgggagac
cagccgtttcctgacgatgtgccgtttgaaagcggcagggtgcaaagtgccgtcagccgg
ttttccctgtttcagacccatcttgaccggtcgcctaaatacgaagaaatcgcacagttt
caattgacataa
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