Bacillus sp. SDLI1: AUL54_20310
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Entry
AUL54_20310 CDS
T05207
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bacs
Bacillus sp. SDLI1
Pathway
bacs03410
Base excision repair
bacs03430
Mismatch repair
bacs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUL54_20310
03430 Mismatch repair
AUL54_20310
03440 Homologous recombination
AUL54_20310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacs03400
]
AUL54_20310
DNA repair and recombination proteins [BR:
bacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AUL54_20310
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AUL54_20310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AUL54_20310
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Rib_mS39_PPR
Motif
Other DBs
NCBI-ProteinID:
AME08511
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Position
4130660..4132387
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AA seq
575 aa
AA seq
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MAYKLIGNNDYNFNPLLTILKNRGIENPQSFIDVNQSSVIHFSKLNNIDKAADCLIKHLE
NKNKIFVQVDSDVDGYTSSSIIINYIKAIYPKADIQYRIHEGKEHGIFIDTIPEEVDLVL
IPDAGSSQIEEHEELEKNGVDVIVIDHHECERESQHAIVVNNQLSNEYSNKTLTGAGMAY
KLCQAIDYKLGKNKAEQFLDLVSIGNIADSADSRNLETRYFMIEGLRNIKHPLIKKLFKK
QEFSTKGCKNIQNTQFYINPLINAAIRVGSGEEKDQLLRSFLLSKEKVPYKKRGQDEINL
VSIHDDTARILGNLKAKQKRIVDAATVEIKNRIEEKNLAANKVLIVYTEGILDKALTGLV
ANVLANEYKKPVLLTRKSDEEEGVLSGSIRGYEDGYIKDFKKELTDTGLFEFVKGHPNAA
GFAIKRENLILVNEVLNEKFKDVETGEEVQNVDFEIPANQLRKEFLIKLYSYKDFWGYKV
EEPLIAITELEIDIEQIEHLGKKNKTTVKFKYGDIEYIRFKSDTEYFEKLTQSNGTLILN
VVGKAKVNEYKGRQTPQIEIYDLEVVRTNKKELVF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtggcttataagctcattggtaacaatgattataatttcaacccattattgacaatctta
aaaaacagagggattgaaaatccccagagctttattgatgtgaatcagagctcagtcatt
catttttcaaaactcaataatattgataaagcagctgattgtttaataaagcatttagag
aataaaaataaaatatttgttcaagtagatagtgatgtagatgggtatacatccagttca
atcattatcaattacataaaagcaatttatccgaaagctgatatacaataccggattcat
gagggcaaagagcatggcattttcattgatacaattcctgaagaagtcgacttagtttta
attccggatgctgggtcaagtcaaattgaagaacatgaggagctagaaaagaatggcgta
gatgtaattgttattgaccatcatgaatgtgaaagagaatctcaacacgctatagttgtc
aataatcaactctcaaatgagtattcaaacaaaacattaacgggtgctggaatggcatat
aaactttgccaggctattgattataagctaggtaaaaacaaagcggaacaatttttagac
ctggtttctattggaaatattgccgattcagctgattcaaggaatctagagaccaggtac
tttatgattgaaggcttgaggaacattaagcacccattaatcaaaaaactgtttaaaaag
caagagttttcaaccaagggttgcaaaaacatacagaatacacagttctatattaatccg
ttaattaacgcagctataagggtcggtagcggtgaagaaaaagatcaattgttgagatcg
tttctgttgtctaaagaaaaagttccatacaaaaaacgtggacaagatgaaattaatctg
gtgtcaattcacgatgacacagccaggattttggggaaccttaaagctaaacagaaacgc
attgttgatgcagctactgttgaaattaaaaacagaattgaagaaaagaatttggcagct
aataaagtacttatagtctacactgagggaattttggataaagccttaactgggctggtc
gcaaatgtacttgcaaacgaatataaaaagccagtcttgctgactaggaaaagcgatgaa
gaagaaggggtgttgagcgggtctattcgagggtatgaggatggctacatcaaagacttt
aaaaaagagctaacagatacaggactatttgaatttgttaaaggccatccaaatgcagcc
ggatttgcaatcaaacgtgaaaacttgattttggttaatgaagttctaaatgaaaaattt
aaagatgtagagacaggtgaagaagttcaaaatgttgactttgagataccggctaatcaa
cttagaaaggaatttttaattaagctgtatagctacaaagacttttggggctacaaagtc
gaagaaccattaatagctataacagaacttgaaattgacatcgaacaaattgagcattta
gggaaaaagaataagacaacggttaaatttaagtatggagacattgaatacatacgcttt
aaaagcgatacagaatactttgagaaacttactcaatcaaatggaactttaatacttaat
gttgttggtaaggcaaaggtaaatgaatataagggcaggcaaacacctcaaattgaaatt
tatgacttggaggtggttcgtacaaataaaaaagaacttgtgttttaa
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