Bifidobacterium actinocoloniiforme: AB656_00750
Help
Entry
AB656_00750 CDS
T04036
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact03420
Nucleotide excision repair
bact03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB656_00750
03430 Mismatch repair
AB656_00750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_00750
Enzymes [BR:
bact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB656_00750
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB656_00750
MMR (mismatch excision repair)
Other MMR factors
AB656_00750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AKV55035
UniProt:
A0A086YZM7
LinkDB
All DBs
Position
218694..220223
Genome browser
AA seq
509 aa
AA seq
DB search
MGHNGGVNERQQAERILDGLDEEQTRAARAVDGPVRIIAGAGAGKTRTITRRIAYACASG
AWDPRRTLAVTFSVKAAEELRGRLRGLGAPDGIRAATFHSAALHQLNRAWADISGDHFPQ
LVPDLRPFMSTAYQRVTGRPDPDPVELRDLLEEASWGKVSLVAPDDYARVCAAVGRVPPA
GLEPARMADVMDAFETEKANHGAMDFNDILLMCCHVMEEFDEVAERIRRGVGWLTVDEYQ
DVSPLQHQLLDLWLGQGRSVCVVGDPAQTIYSFAGASSYYLMDFDHEFAPVSADVELGVD
YRSTPQVVGMANKVLAASPERGNYLRLTAAKESGPKVAMTRYRSDEDEAQGVVRRIQHLV
SRGAKPGQCAVLTRINAQQAVIRVALKHAGINYRVRADSGWQRSSTAAELAQLDDDELVK
VLRGEGPGEVTISTIHAAKGLEFDHIFLVGCSEGLIPFGSPQAGPELEEERRLMYVAVTR
AGRTLHLSFAERKEAQGGGGRSPSRFLRA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaatgggggtgtgaacgaacgacagcaggctgagcggatcctcgacgggctg
gacgaggagcagacgcgggcggcgagggccgtggacgggccggtgaggatcatcgccggg
gctggggcgggtaagacccggacgattacgcggcgcatagcctatgcctgcgcgagcggg
gcctgggacccccggcggaccctggcggtcactttctcggttaaggccgctgaagagctg
cggggccgcttgaggggcctgggagcccctgacggcatccgcgcggccactttccactcg
gcggccctccaccagttgaaccgggcttgggcggacatcagcggcgatcactttcctcag
ctggtaccggacctgcgtccctttatgtccacggcctatcaacgggtgaccggtcggccg
gacccagatccggtagaattgcgcgatttgttggaggaggcgagctggggcaaagtgagc
ctggtcgccccggatgactacgccagggtctgcgcggccgtgggacgggtgccgcccgca
ggcctggagcccgcgcgcatggccgatgtgatggacgctttcgagactgagaaagccaac
catggggctatggatttcaacgacatcctgctcatgtgctgccacgtgatggaggagttc
gacgaggttgccgagcgcatacgtcgcggcgtgggctggctgaccgtggacgaataccag
gatgtctcacccctgcagcaccagctcctggacctgtggttggggcaagggcgttctgta
tgcgtcgtcggggacccagctcagaccatttactctttcgccggcgcctcctcctattat
ttgatggactttgaccacgaattcgcaccggtcagcgcggatgtggagttgggtgtggac
tatcggtccaccccccaggtggttggcatggcgaacaaggtcctggccgcctcgcccgag
cgcggcaattacctgcgcctgaccgccgccaaggagtccgggcccaaggtggcgatgacc
cgctaccgtagcgacgaggacgaggctcagggcgtggtccggcgtatccagcacctggtc
agccggggggccaagcctggccagtgcgcggtcctgaccaggatcaacgcccagcaggcg
gtcatccgcgtggcccttaagcacgcgggcatcaactaccgggtgcgcgccgactccggc
tggcagcgctcgtccacagccgccgaattggcccagctggacgacgacgagctggtcaag
gtccttcgcggagaagggcccggcgaggtgaccatctctaccatccatgcagccaaagga
ctggagttcgaccacatcttcctggtcggttgttcggaggggctgattccgttcggctcg
ccccaggcgggccctgagctggaggaggagcggcggctcatgtacgtggcggtcacccga
gcagggcggaccctccacctctccttcgctgagcgcaaggaggcccaagggggcggcggg
cgctcgccttcgcgtttcctgcgggcgtga
DBGET
integrated database retrieval system
