Bifidobacterium actinocoloniiforme: AB656_01705
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Entry
AB656_01705 CDS
T04036
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact03420
Nucleotide excision repair
bact03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB656_01705
03430 Mismatch repair
AB656_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_01705
Enzymes [BR:
bact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB656_01705
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB656_01705
MMR (mismatch excision repair)
Other MMR factors
AB656_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AKV55178
UniProt:
A0A086Z068
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All DBs
Position
431758..434409
Genome browser
AA seq
883 aa
AA seq
DB search
MFEDPDLVQRSADELLAGLNPQQAEAVQYRGPALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQVLAITFTNKAASEMRERLGQLIGPVAQRMWVSTFHSACVRILRRDGREIGLKSGF
SIYDSADSERLIKLIGHDLNVDLKRFTPRSILSHISDCKNSLETWQERLKEFAPDYRPGQ
RGQFTARFGNEEELYAIFYAEYEHRLALANAVDFDDLIVRTVDLLRSAPLVAQYYRHKFR
YILVDEYQDTNHAQYVLLRELAGVDDAGDARTQGPGPSGSRPVAAGKDGPAWITVVGDSD
QSIYAFRGADISNIRDFEKDFPGAKTIMLEQNYRSTQTILDAANAVISKNTSRRPKKLWT
ALGEGDPIVGYAADNAQQEAAWIATETARLRAEEGVPYSDMAIMYRANAQSRPLEEALIN
AGLPYQLVGGTKFYERREVKDALAYLQAIANPDDDVNLRRIMNVPKRGLGPRAEALVSMY
ADAHASSFWSGIEHYESIEGLPTLTAKKLEAFRAIMRELTAFAAEHDSKPSQIVAEVLEV
SGLLPELRKSVDPQDASRVENLSQLQSVAAEFEQKTPDATLAGFLETTALVADSDQLPGE
GEETGKLTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRSLEDVSEMEEERRLAYVGITRAK
RRLYLTRASVRAQWGQANEMLPSQFLDDIPESLIDWKRKQSAVERMRGGWERDGEDDEFG
GFEDGAFTSSSVYGSSRGSSSTGGSYGSYGSGSYGSRGARGSQGGHSGSGYYGSGRSTGS
RGSYGSGRAHGSSGSSKAWSQSGRVTTRRTKPTRSSQAGSAQPSGSKLSIDDFHRGDKVA
HDQYGLGTVVDVQDKGHNSVLTVDFGSDGVKRLMLRVAPIEKL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaagatcctgatctggtccaacggtccgccgatgagctcctggctgggctcaac
ccccagcaggcggaggcggtccaataccgtggaccggccttactgatcggggccggcgcg
ggttcgggcaaaacccgcgtgctgacccggcgaatcgcctggattctcagtcagttcgga
gcttggccaagccaggtcctcgccatcactttcaccaacaaggcggcctcggagatgcgc
gagcgcttggggcagctaatcgggccggtggcccagcgtatgtgggtatccaccttccac
tcagcgtgcgtgcgaatcctgcgccgggacggccgtgagatcggactcaagtccggtttt
tcgatatacgattcggctgactccgaacgcctgatcaagctgatcggccacgacctgaac
gtggacctgaaacgcttcacgccccgttcgatcctgagtcatatctccgattgcaagaac
agcctggagacctggcaggagcggctcaaggagttcgctcccgattatcggccgggtcag
cgcggccagttcacagcccgcttcggcaatgaggaagagctctacgcaatcttctacgcc
gagtacgagcaccggctggccctggctaacgcggtcgacttcgacgatttaatcgtgcgc
acggtcgatctcctacgttcggcgccactggtggcccagtactaccggcataagttccgc
tacatcctggtcgacgagtaccaggacaccaaccatgcccaatatgtgctcctgcgggag
ttggctggggtggatgacgccggggatgcgcggacccaggggccagggccgtccgggtcc
aggcctgtggccgccggtaaggatgggccggcctggattaccgtcgtcggcgactctgac
cagtccatctacgctttccgcggggccgacatcagcaacatccgcgacttcgagaaggac
ttccccggagccaagaccatcatgctggagcagaactaccgctccacgcagaccattttg
gacgccgcgaacgcggtgatttccaagaacacctcccgtcggcccaagaagctgtggacg
gccctgggtgaaggtgatccgattgtcgggtacgcggccgacaacgcccagcaggaggcg
gcctggatagcgaccgagacggcccgcctgcgcgctgaggaaggcgtcccttactcggat
atggcgatcatgtaccgggccaacgcccaatcccgtccccttgaggaggccctgatcaac
gcggggctgccctaccagctggtcggtggcaccaagttttacgagcgtcgtgaggtcaag
gatgccctggcgtatttgcaggcgatcgccaaccctgacgacgatgtgaacctacgccga
atcatgaacgtgcctaagcgcggtctgggaccaagagccgaggctctggtctcgatgtac
gccgacgcccatgcgtccagcttctggtcgggcatcgagcattacgagtcgattgaaggc
ctgccgacgctgaccgctaaaaagttggaggctttccgcgcgatcatgcgcgagctgact
gcattcgcggccgaacacgactccaagccctcgcaaatcgtggcggaggtcctcgaagtc
tccggcctgcttcctgagctgcgtaagtctgtggacccccaggacgcctcccgggtcgag
aacctctctcagttgcagtccgtggctgctgagttcgaacagaaaacgcccgatgcgacc
cttgcaggcttcctggagaccacggccttggtcgccgactccgaccaactgccgggcgaa
ggggaggagaccggcaaactcacactcatgaccctgcacaccgccaaaggcctggaatac
cctgtggtctttctgaccggtatggaacaggggaccttcccgcactcacgcagcctggag
gacgtcagcgagatggaggaggagcgacggctcgcctacgtgggcatcacccgcgccaag
cgacggctctacctgacccgggcgtcggttcgcgcccagtgggggcaagccaacgaaatg
ctccccagccagttcctggacgatatccctgagagcttgattgactggaagcgcaagcag
tccgccgtcgagcgcatgcggggaggttgggagcgggacggcgaggacgacgaattcgga
ggtttcgaggacggcgctttcacctcgtcctccgtttacggttcgtctcgtgggtcgtca
tccactggcggctcctacggctcgtacgggtcgggttcgtatggttcccgtggcgctcgc
ggctcgcagggcgggcattcgggcagtggctactacggctccggcaggtcaacgggatca
cggggctcctacggctctggccgtgcccacgggtcgtcaggctcctccaaggcgtggtcc
caaagcgggcgggtgaccaccagaaggaccaagcccacgaggtcgtcccaggcggggtcg
gcccaaccctccggctccaagctctcaatcgacgacttccaccggggagacaaggtcgct
cacgatcagtacggtttgggcaccgtcgtcgatgtgcaggacaaaggccataattcggtg
ctgaccgtggatttcggctccgatggcgttaagcgactcatgctgcgggtcgctccaatc
gagaagctctga
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