Bifidobacterium actinocoloniiforme: AB656_02755
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Entry
AB656_02755 CDS
T04036
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bact
Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bact03032
]
AB656_02755
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_02755
Enzymes [BR:
bact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB656_02755
DNA replication proteins [BR:
bact03032
]
Prokaryotic type
DNA Topoisomerases
AB656_02755
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB656_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
DUF4890
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKV55329
UniProt:
A0A086Z0S8
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All DBs
Position
681384..684002
Genome browser
AA seq
872 aa
AA seq
DB search
MASHRKSNPGYDMRQIKEHIVETPLGEEMSKSFLEYAYSVIYARALPDARDGLKPVQRRI
IYQMGQMGLTPDKPYMKSARAVGEVMGKLHPHGDSSIYEAMVRLAQPFAMRLPLVDGHGN
FGSLDDGPAASRYTEARLASAALGMNADIDEDTVDFTPNYDNKLKEPTVLPSAIPNLLVN
GSSGIAVGMATNMITHNLGEVVAAAKHLMTHPQASLDELMTYLPGPDLPGGGVIVGREGI
RQAYESGRGAFVTRSVTHTENVTARKKAIVVTELPFMVGPERVLERISEGVKNHRIEGIS
GAIDLTDRHNGTRLVIELKSGFDPAKVLAQLFKYTPLEDSFTINNVALVDGRPHTMGLKE
LLEVWIKHRRQVVHRRSKYRKQRAQERLHLVEGLLLAMIDIDEVIQVIRTSEDADTAKTR
LMAVFDLDEVQAKYILELRLRRLTKMSRIELEGERDELKEQLEALELILSSAAELDKVVV
DEMDQAVQAWGSPRRTVILDAEPSGDLEPVALQGGSDPKLTQGERTSDLGLATVSAKAAS
TADPVAMQVKDEPCTLLLSASGLIARSGEGALDLWRARSAADGRADDDQIVSIFVTHTLA
DYALVTSAGRLVTAPVADLPQVPMTTSLSLAGGVRADELIGGTHSTSPVEGERTVAAIDL
SDQRPLGLGTRQGVVKRWNRVSPSTMDSWSIIDLKEGDSLLFAAPAADDDRMVLISSDSC
LLTYEAAKVRPQGRTSAGMTGIRLAEGRKVAAFAVVPAGQVSWTYREGENGLTSQSGAVV
LTVAGSGEALPGTENGAAKVTPLQMYPVKGRGTGGVRSQRFLKGQDQLILACVGPWPLRA
STASGRPVDLPDVDMRRDASGQDLAAPIAYVA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcatcgcaagagcaaccccgggtacgacatgcggcagatcaaggaacacatc
gttgaaacgcccctgggcgaggagatgagcaaatccttcctggagtatgcctactcggtc
atctacgcccgggccctgccggacgcccgggatggattgaagccggtccagcgccgcatc
atctaccagatgggccagatggggctcacgcccgacaagccttacatgaagtccgcacgc
gccgtcggcgaggtgatgggtaagctccacccccacggcgattcctcgatttacgaggcg
atggtccgcctcgcccagcctttcgccatgcgtttacccctggtggatggccatggcaac
ttcggctccctcgacgacggccctgcggcctcccgttacaccgaggcccgcctggcgtcc
gcagcgctcggcatgaatgccgatatcgacgaggatacggtcgatttcactcctaactac
gacaacaaactcaaagagccgaccgtcttgccctcggccatccccaacctgctggtcaac
ggttcctccggcatcgccgtgggcatggccaccaacatgatcacccataacctgggcgaa
gtggtcgcggcggccaagcacctaatgacccacccgcaggccagcttggatgagctgatg
acctacctgcctggacccgacctgcccggcgggggcgtgatcgtggggcgcgagggcatc
cgtcaggcctacgagagcggccgcggcgctttcgtgacccgctccgtgacccataccgag
aacgtgaccgcccgcaagaaggccatcgtcgtgaccgaactgccgttcatggtgggaccc
gagcgggttctggagcgcatctccgagggggtcaagaaccaccggatcgaggggatctcc
ggcgcgattgacctgaccgaccggcacaacggcacccggttggtcattgagctcaaatcc
ggtttcgacccagccaaggtactggcccagctcttcaagtacacccccttggaggactcc
ttcacaatcaacaacgtggcacttgtggatggccgcccccacacgatgggtctgaaggaa
ctccttgaggtctggatcaagcaccgccgtcaggtcgtgcaccgccgatccaagtaccgt
aagcagcgcgcccaggagcgcctgcatctggtggagggcctgctcctggccatgatcgac
attgatgaggtcatccaggtgattcgcacctcggaggatgccgacacggccaagacacgc
ctgatggcggtcttcgacctggacgaggtccaggccaaatacatcctggagctccgtttg
cgccgactgaccaagatgagccgaatcgagttggagggcgagcgcgacgaactcaaagag
cagctggaggccctggagctgattctgagttccgccgccgaactcgacaaagtggtggta
gacgagatggaccaggcggtccaggcctggggcagcccacggcgcaccgtcatcctggac
gcggagccttccggcgatctggagcccgtggcccttcaaggcgggtccgatcccaagctc
acccagggcgaacgaacctccgacctgggcttggccacggtcagcgcaaaggccgcttcg
accgcggacccggtcgcaatgcaggtcaaggacgagccctgcaccctcctgctgagcgcg
tccggcttgatcgcccgctcaggcgagggggcccttgacctatggcgcgcccgatccgca
gccgatggacgggcagacgacgatcaaatcgtctccatcttcgtcacccacacgctggcc
gactatgcattggtcacatcagctggccgtctggtcacggcaccggtggccgacctgccc
caggtgcccatgaccacctcgctgagcctggcaggcggagtgcgcgccgatgagctcatt
ggcggcactcattcgaccagcccggtcgagggtgaacgcactgtggccgcgattgacctg
tccgaccaacgcccgctagggcttggcacccggcaaggcgtggtcaagcgttggaaccgc
gtctcccccagcacgatggattcctggtcgattatcgacctgaaggagggcgacagtctc
ctgttcgcggctccagcggccgatgacgaccgcatggtcctcatctcctccgactcctgc
ctgctcacttacgaggccgccaaggttcgcccgcaaggtaggacttctgctggcatgacc
ggcatccgtctggccgagggccgcaaggtggccgccttcgcggtcgtgcccgcggggcag
gtctcctggacctatcgcgagggagagaacggcttaaccagccagtccggggccgtggtc
ctgactgtggcgggttcgggcgaggccctgccgggcactgagaacggcgccgctaaagtc
acccccctgcagatgtacccggtcaaggggcgcggcaccggcggcgtgcgctcccagcgt
ttcctcaaggggcaggaccagttgatcctggcctgcgtaggcccctggcccctgcgcgct
tcgaccgcctcgggccgtccggtcgacctacctgacgtggatatgcgccgtgatgcttca
ggacaggacctggcggcgccaatcgcctacgtcgcttga
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