Bifidobacterium actinocoloniiforme: AB656_02770
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Entry
AB656_02770 CDS
T04036
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bact
Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB656_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bact03021
]
AB656_02770
Transcription machinery [BR:
bact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB656_02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF848
DprA_WH
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AKV56084
LinkDB
All DBs
Position
complement(691381..692745)
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AA seq
454 aa
AA seq
DB search
MAAPAKTKARKVPSKGGAKSSSSSTRKAKGSSKSAASSSKARSSKTTTKATVKTKASKSS
EHDEALEDKAPEELEEDQELDIDDLEEGQEDQVEDEEPDGEVDGNEDEEESPKPVVTPPD
IKGAFVVSDSDDDENVTPSGNPKRRVVTAGATADPVKDYLKQIGRVSLLNAEQEVDLSER
IEAGLYAQHLLDTEGEDMTFKRKRELKWAANDGKKAKDHLLEANLRLVVSLAKRYTGRGM
LFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRVPVHMVEV
INKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEF
GDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRV
YGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctcccgcgaagaccaaggcccgcaaggtccctagcaagggtggggccaagtct
tcgtcctcctccactcggaaggccaaaggctcatccaaatcagccgcctcctccagcaag
gctcgatcctccaagaccaccactaaagccacggttaagaccaaggcctcaaaatccagc
gaacacgacgaagccctggaggacaaggcgccagaggagctggaagaggaccaggagctt
gacatcgacgatttggaagagggccaagaggaccaggtcgaggacgaagagccggacggc
gaagttgacggcaatgaggacgaggaggagagccccaagccagtggtcacgcctcctgac
atcaagggcgctttcgtggtctccgactccgacgatgacgagaacgtgaccccctccggc
aatcccaagcgtcgcgttgtcaccgccggggccaccgcggacccagtcaaggattacttg
aagcagattggccgcgtctcgctgctgaacgccgaacaggaggtggacctctccgagcgg
atcgaggctggcctgtacgcccagcacctcttggacaccgaaggcgaggatatgaccttc
aagcgtaagcgcgagctcaagtgggccgccaacgacggcaagaaggccaaggaccacctg
ttggaggccaacctgcgtctggtggtctccctggccaagcgctacacaggccgtggaatg
ctcttcctggacctgattcaggagggcaacttaggactgatccgcgccgtggagaagttc
gactacaccaagggatacaagttctccacctacgccacctggtggattcgccaggccatc
acccgagccatggcggaccaggcgcgcaccatccgcgtgcccgtccacatggtcgaggtc
atcaacaagctttcccgggtccagcggcagatgctgcaggacctgggccgtgagcccacg
cccgacgagttggcccgtgagttggacatgccggtcgaaaaggtccaagaggtccagaag
tacggccgtgagcccatctccctgcacacccctctgggcgaggacggtgattccgagttc
ggcgacctgattgaggatacggacgccatcgcgccttcggacgccgtggccttctctttg
ctccaggagcagttcaaacaggtgctggagaccttgagcccgcgtgaggccggcgtgatt
aaaatgcgctacggcctggaggacggtcagcctaagaccctggatgatatcggccgggtc
tacggggtcacgcgcgaacgcatccgtcagatcgaatccaagaccatgtccaaactgcgc
cacccctcgcgttcgcagaccttgcgtgacttcctggaccagtga
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