Bifidobacterium actinocoloniiforme: AB656_03470
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Entry
AB656_03470 CDS
T04036
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB656_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_03470
Enzymes [BR:
bact01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AB656_03470
DNA repair and recombination proteins [BR:
bact03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB656_03470
Prokaryotic type
AB656_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AKV56106
LinkDB
All DBs
Position
868332..869012
Genome browser
AA seq
226 aa
AA seq
DB search
MSELIEPGWARALAPVEPQIHRMGDFLRSELAQGHRYLPASKNILRAFTIPFDSVKVLLV
GQDPYPTPGHPVGLSFCVEPNVDPVPGSLRNIFTELVSDLGVARPTNGDLTPWTHQGVLL
LNRCLTVRVGKPASHRGKGWEEVTDAAIRALNARKDPHGKPKPLVAILWGRQAQSLEPLL
TNAYVIKSPHPSPLSARYGFFGSKPFSRTNEALRSMGAEPVDWRLR
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgagctcatcgaaccaggctgggcgcgggcgctcgcccccgttgagcctcagatt
caccggatgggggacttcctgcgctccgaactggcccaaggccaccgctacctgccggcc
tccaagaacatccttcgggccttcacgattcccttcgactcggtcaaggtcctgctcgtg
ggccaggacccctaccccacccccggccatccggtgggactgagcttctgcgtggagccg
aatgtggacccagtgcccggaagcctgcgcaacatcttcaccgaactggtctccgacctc
ggcgtagcccgtcccaccaacggcgatttgaccccctggacccaccagggcgtcctcctg
ctcaaccgctgcctgacggtgcgcgtcggcaagcccgccagccaccgaggcaagggctgg
gaggaagtcaccgacgccgccatccgggccctgaacgcccgcaaggacccgcatggcaag
cccaaacccctggtcgcgatcctgtggggcaggcaggcgcaaagcctcgagcccctgctg
accaacgcttacgtcatcaaatcgccccacccttcacccctgtcggcccgctatggcttt
ttcggctccaagcctttctcacggaccaacgaagccctgcgctcgatgggggctgagccc
gtggattggcggctgcgctag
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