Bifidobacterium actinocoloniiforme: AB656_03560
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Entry
AB656_03560 CDS
T04036
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact00220
Arginine biosynthesis
bact00240
Pyrimidine metabolism
bact00250
Alanine, aspartate and glutamate metabolism
bact01100
Metabolic pathways
bact01110
Biosynthesis of secondary metabolites
bact01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AB656_03560 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AB656_03560 (carB)
00220 Arginine biosynthesis
AB656_03560 (carB)
Enzymes [BR:
bact01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AB656_03560 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
ATP-grasp_3
RimK
Motif
Other DBs
NCBI-ProteinID:
AKV55452
UniProt:
A0A086Z188
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Position
complement(887572..890943)
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AA seq
1123 aa
AA seq
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MPKREDIHSVMVIGSGPIVIGQAAEFDYSGTQACRVLKEEGIRVILVNSNPATIMTDPEL
ADATYIEPIDRDILERIIAKERPDALLPTLGGQTALNAAEELGRAGVLERYGVELIGASL
QAIDRGEDRQMFKEVVAAAGAESAKSRIAHSLEEADAAAAELGFPLVVRPSFTMGGLGSG
IAHDHEELHRIAGAGIHYSPTNEVLLEEGIEGWKEYELELMRDRKDNVVVVCPIENVDPV
GVHTGDSVTVAPVFTLTDREYQRMRDIGIAIIRGVGVETGGCNIQFALNPSNGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEISNDITRSTPASFEPAIDYVVTKVPR
FAFEKFPGADDALTTSMKSVGESMALAGSFQESLGKAMRSVDKRNMGFSWEGERPDRAEV
DRLLEAMARPTERRYLYIQRAFWGGASVDEVFQATKIDPWFLEQISQINQLALAVREADF
LDDDFMRRAKRAGLSDLQISRLRGMGEQGETVIRELRWNYGIRPVYKTVDTCAAEFDAAT
PYYYSTYAEESELKPRDREAVIILGSGPNRIGQGVEFDYTCVHAVQELGRDYDTIMVNCN
PETVSTDYDVSDRLYFEPLTFEDVLEIYRAELRMGPVKGVIVQLGGQTPLSLAARLKEAG
VPILGTSPESIDLAENRELFGQVLEREGLNAPRYGTAMSLVEAQHAAHTIGYPVLVRPSY
VLGGRGMEIVYDDAQLGKYVERALSQAQADTVVSGRLPSPLLIDKFLQDAIEIDVDALYD
GRELYIGGIMEHVEEAGVHSGDASCTLPPSTLSDKQITRLREATLAIAEGCGVRGLLNVQ
FAFMANTLYVIEANPRASRTVPFASKATGTALAKAAARIMVGESIADQRARGLLLPSNDG
GTSRPGQPVAVKEAVLPFKRFRTPVGKSVDVLLGPEMHSTGEVMGFDRDFPHAFAKSQLA
AYQGGLPTSGRVFLSVNDADKRQLPMIASRLHELGFSICATQGTASVLRRYGIDVALVGK
ISDSPEAREPQDPSLKRLGSNAVELIEQGAIDMVLNTPSTRDSRSDGYLIRAAAVAADLP
QFTTATQLSAVLMAIEAVKQGDYQVMSIQEHARLLFELEKEQG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgcgaagacatccattcagtcatggtcatcggctccgggccgatcgtcatc
ggccaggccgcggagttcgattattcgggcacccaggcctgccgggtcttgaaggaggag
ggcatccgggtgatcctggtcaactccaacccggccaccatcatgaccgaccctgaactg
gccgacgccacctacatcgagccgatcgaccgcgacatcctggagcggatcatcgccaag
gagcgccccgacgccctcctgcccacgctgggcgggcagacggccctgaacgccgcggag
gagctggggcgcgccggggtcttggagcgctatggggtagagctgatcggcgcctcactc
caggccatcgaccgaggcgaagatcggcagatgttcaaggaggtggtcgctgccgcaggc
gctgaatcagccaagtcccgcatagcccacagcctggaggaggcggacgctgccgccgcc
gagctgggcttcccgctcgtggttcgtccctccttcacgatgggtggcctcggttcgggc
atagcccacgaccatgaggagcttcatcggatcgccggggccggcatccactattcgccc
acaaacgaggtcctgctggaggagggcatcgaaggctggaaggagtacgagcttgagctc
atgcgcgaccgcaaggacaacgtggtcgtcgtctgcccaatcgagaacgtggaccctgta
ggggtgcacaccggcgactccgtgaccgtggccccggtcttcacgctgaccgaccgcgag
taccagcggatgcgggacatcggcatcgcgatcatccgtggcgtgggcgtcgagaccgga
ggctgcaacatccagttcgcgctcaacccgagcaacggccgcatcatcgtcatcgagatg
aacccgcgcgtctcccgttcatccgccctggcttccaaggccaccggtttcccgatcgcc
aagatcgccaccaagctggccctgggttacaccctggacgagatctccaacgacatcacc
cgctccacccccgcctccttcgagccggccatcgactatgtggtcaccaaggtgccccgc
ttcgccttcgagaagttccctggcgccgatgacgcgctgaccacctcgatgaagtcggtg
ggcgagtccatggccctggccggttccttccaggagtccttgggcaaggccatgcgctcg
gtcgacaagcgcaacatgggcttctcctgggagggcgaacgacccgaccgggctgaggtc
gacaggctcctggaagccatggccaggcctacggagcggcgctacctgtatattcagagg
gccttttggggcggtgccagcgtcgacgaggtcttccaagccacgaaaatcgacccttgg
ttcctggagcagatcagccagatcaaccagctggctttggcggtgcgcgaggctgacttc
ctggacgatgacttcatgcgccgggcgaagagggcgggcctgtccgatttgcaaatctcc
cgcctgagggggatgggcgagcagggcgagacggtgatccgtgaactccgctggaactac
gggatccgtccggtctacaagaccgtggacacgtgcgcggccgagttcgacgcagccacc
ccttactactactcgacctatgccgaggagagcgagttgaagccccgcgatcgcgaggcg
gtcatcatcctgggttcggggcccaaccggatcgggcaaggggtggagtttgactacact
tgcgtgcacgcggtccaggagctgggccgggactacgacacgattatggtcaactgcaat
cccgagaccgtttcgaccgattacgatgtgtccgacaggctctacttcgaaccgctgacc
ttcgaggacgtgctggagatctaccgggccgagctgcgaatgggtccggtcaagggggtc
atcgtgcagctgggcgggcagacgcccttgtccctggcggcccggctcaaggaggctggc
gtgccgatcctgggcaccagccccgagtcgatcgacctggcggagaaccgtgagcttttc
gggcaggtcttggagcgcgagggcctgaacgccccccgctacggcacggccatgtcgctg
gtggaggcccagcacgcggcccacaccattggctacccggtgctggtgcggccctcctac
gtgctgggcgggcgcggtatggagatcgtctatgacgacgcccagctgggcaagtacgtg
gagcgcgccctgagtcaggctcaggcggatacggtggtctccggccggctgccttcgccc
ttgctgatcgataaattcctgcaagacgccatcgagatagacgtggatgccctttacgat
gggcgcgaactctacatcggcggcatcatggagcatgtggaggaggccggcgtgcactcg
ggcgacgcctcctgcaccttgcctccttccacgctttcggacaagcagatcacccgcctg
cgcgaggccacgctggctatagccgaaggctgcggggtgaggggcctgctcaacgtgcag
ttcgctttcatggccaacaccctgtacgtgatcgaagccaatccgcgcgcctcgcggacc
gtgccgttcgcctccaaggccaccggcacggccctggccaaggccgcggcccggatcatg
gtgggtgaatcgattgctgaccagcgcgcccgtggcctcctgctgcccagcaatgacgga
gggaccagccgacctgggcagccggtggcggtcaaggaggcggtcctgcccttcaagcgc
ttccgcacgccggtgggcaagagcgtggacgtgctgctggggccggagatgcattcgacc
ggcgaagtcatgggcttcgaccgggactttccccacgccttcgccaagagccagctggcc
gcctaccagggagggctgccgacctccggcagggtcttcctgtcggtcaacgacgccgac
aaacgccagctgccgatgatcgccagccgcctgcacgagctgggcttctccatctgcgcc
acccagggcactgcttcagtcctgcgccgatacgggatcgacgtggccttggtcggcaaa
atcagcgacagccccgaggcccgcgagccccaggatccttcgctcaagcgcctggggagc
aatgcggtggagctgattgagcagggcgcgattgacatggtgctgaacacgccttcgacc
cgggactcccgctccgacggctacctgatccgcgcggccgcagtggccgccgacctgccg
caattcacgacggccacccagttgtcggccgttttgatggcgattgaggcggtcaagcag
ggcgactaccaggtcatgagcatccaggagcatgcccgcctcctcttcgagttggagaag
gagcaaggctaa
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