Bifidobacterium actinocoloniiforme: AB656_03815
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Entry
AB656_03815 CDS
T04036
Name
(GenBank) ATP-dependent endonuclease
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bact
Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bact03032
]
AB656_03815
03029 Mitochondrial biogenesis [BR:
bact03029
]
AB656_03815
Enzymes [BR:
bact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AB656_03815
DNA replication proteins [BR:
bact03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
AB656_03815
Mitochondrial biogenesis [BR:
bact03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
AB656_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
NTPase_1
Viral_helicase1
AAA_5
DEAD
MeaB
AAA_16
AAA_11
nSTAND3
SLFN-g3_helicase
TrwB_AAD_bind
cobW
IstB_IS21
SH3_13
AAA_24
Herpes_Helicase
AAA_14
UvrD_C_2
AAA
AAA_18
NAT10_TcmA_helicase
ATPase
Zeta_toxin
ResIII
AAA_28
MMR_HSR1
DnaB_C
KdpD
FtsK_SpoIIIE
ABC_tran
ATPase_2
MobB
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AKV55489
UniProt:
A0A086Z1D9
LinkDB
All DBs
Position
complement(951312..952718)
Genome browser
AA seq
468 aa
AA seq
DB search
MQQSEALTILDAGANVFITGAPGAGKTYVLNEFIARARRRGAKVAVTASTGIAATHINGQ
TIHSWSGVGISKVMTDGLLKRIRSRRKRQISSADILVIDEVSMMHAWLFDMVDQACRAVR
HSPEPFGGIQVVLSGDFFQLPPVSRSVRDNDLVAASPEFQTSRAAYAQAGKDPEGFVTES
LVWDELEPVTCYLTEQHRQDDGQLLTVLTDIREGSVSQEDHDVLSGRIGIQPQPGQVAVH
LFPVNRQADTLNDLRLAQITEEPHEYASTQTGEPRLVERLKKNMLAPERLQLKTGAAVMA
LRNDQDHQYVNGSIGTVCGFAPLAKGGWPIVAFENGNTVTMKPAAWEMMDGETVLAAVNQ
VPLRCAWAITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVEALDGLYLDGINEHAFLV
SPEAVILDSELRANSQIACSRLADEGSGSFAKQAIGQEEDEFGQDALF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccgaagccctgaccatcctggacgcgggcgccaacgtcttcataaccggc
gctcccggcgcaggcaagacctacgtgctcaacgaattcatcgcccgagcccgccgacgg
ggggccaaggtggccgtcaccgcctcgactggcatcgccgcgacgcatatcaatgggcaa
accatccactcctggtccggcgtgggcatatccaaggtcatgaccgacggcttgctcaag
cggatcaggagccggcgcaagcggcaaatcagttccgctgacatcctggtcattgacgag
gtttcgatgatgcacgcctggcttttcgacatggtggaccaggcctgccgggctgtgcgc
cacagccctgagcccttcggcggcatccaagtggtgctttcgggcgatttcttccaatta
ccgccagtgtcccgctccgtgcgcgataatgacctggtcgctgccagtcccgagttccaa
acctcccgggccgcctacgcccaggcgggcaaggacccggagggtttcgtgacggaatcc
ttggtctgggatgagctggagcctgtgacctgctacctgaccgagcagcaccgccaggat
gacggccaactgctgaccgtcctgaccgacatccgcgaaggttcggtcagccaggaggac
catgacgtgctctccggccgcatcggcatccagccccagccaggccaggtggccgtccac
cttttccccgtcaaccgccaggccgacacgttgaacgacctgcgcttggcgcaaatcacc
gaggaaccccacgaatacgcctccacgcagaccggggagccccgactggtggaacggctc
aagaagaatatgctggcccccgaaaggctccagctcaaaacaggcgctgccgtcatggcc
ctgcgcaacgaccaggaccaccagtatgtcaacggttcaatcggcacggtctgtggtttc
gcgcccctggccaagggcggctggccgatcgtcgccttcgagaacggcaataccgtcacg
atgaaacctgcggcttgggagatgatggacggtgagactgtgctggcggcggtcaaccag
gtgcccctgcgctgcgcctgggccatcaccatccacaagtcccagggcatgaccctggat
cgtgccgtcatggacctgcgccgcaccttcgccccgggcatgggttacgtggccctctcc
cgcgtggaggccttggacgggctctacctggacggcatcaacgagcacgccttcctggtt
tcgcccgaggccgttatccttgattccgagctgcgagccaactcccaaatcgcctgttca
cgcctggccgacgagggttcgggctccttcgccaagcaagcgataggccaagaggaggat
gaattcggccaggacgcgctcttctaa
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