Bifidobacterium actinocoloniiforme: AB656_04635
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Entry
AB656_04635 CDS
T04036
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bact
Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_04635
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB656_04635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
ABC_tran
Rad51
AAA_22
SLFN-g3_helicase
GvpD_P-loop
AAA_24
AAA
DUF7125
AAA_30
NACHT
EAD2
AAA_14
NTPase_1
nSTAND3
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AKV56138
LinkDB
All DBs
Position
1115251..1116660
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AA seq
469 aa
AA seq
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MAKSATQYVCTECGWTGAKWFGRCPECGQWGTIEEFHEARPGKTRSPGASNSSGRRTQAS
VLSAEAQAQPISQVGSESVERVPTGFEEFDRVLGGGVVPGSVMLVAGEPGIGKSTLLLET
AGNVARSQPGSVLYISGEESQAQVRMRASRVGAIDDSLLLAATTDLGTVLGLIEQTKPSL
AIVDSAQTITSQDVDGISGGSTQVREVASALIDLAKTYDIPVMLVGHVTKDGAIAGPRTL
EHLVDVVCQFEGDSQTALRMLHAAKNRFGPTDEVGCFDMSGQGIEEVKDPARLFLSASEA
PVEGTCVTFTLDGHRSLPIEIQALVTASVLPTPRRNANGIDANRLAMLAAVLYRHGKVNL
LTRDLYVSTIAGGLAKEPGCDLAVAAALASANSAKPIAKTTCAIGEISLTGQVRPVPQLA
HRLSEAARLGFTRAVVPVHRGGRATKPSAGLEVIEVSTLADALEALGAR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcgcaacgcagtatgtatgcaccgaatgcggctggaccggagccaagtgg
ttcggccgctgcccggagtgcggtcagtggggcacgatcgaggagttccatgaggcccgg
cccggcaagacgcgctcgcccggcgcttccaattcgagcggccggcgaacccaggcgtcg
gtcctgtccgccgaggcccaggcccagcccatcagtcaggtggggtcagagtcggtggag
cgcgtacctaccggttttgaggagttcgaccgcgtgctgggcggcggcgtggttcccggt
tcggtgatgctggtggccggcgaacccggcatcggcaaatcgaccctcctcttggagacg
gccggcaatgtggcccgcagccagcccggcagcgtgctctacatctccggcgaggagtcc
caggcccaggtgcggatgcgagcctcccgggtgggcgccatcgacgattccctgctcctg
gcggccaccaccgacctgggcacggtcctgggcctgatcgagcagaccaagccctccctg
gccatcgtggattcggcccagaccatcacctctcaggacgtggacggcatctccggcggc
tccacccaggtccgcgaggtagcttccgccctgattgatttggccaaaacgtacgatatt
ccagtcatgctggtagggcatgtcactaaagacggcgccatcgccggtccgcgcacgcta
gagcacctggtggatgtggtctgccagttcgagggcgactcccagacggccctgcgcatg
ctccacgcggccaagaaccgcttcggccccaccgacgaggtgggctgtttcgacatgagc
ggccaaggcatcgaggaggtcaaggacccggccaggctcttcctgtccgcctcagaggcc
ccagtcgaaggcacctgcgtcacattcacccttgacggccaccgcagcctacccatcgaa
atccaggcgctggtcaccgcgtcagtcctgcccaccccccgccgcaacgccaatggcatc
gacgctaaccgactggccatgctggccgcagtgctctaccggcatggcaaggtgaacctg
ctcacccgcgatttgtatgtgtccacaatcgccggtggcctggccaaggagcccggctgc
gacctggccgtagcggccgccctggcttcggccaactcggccaagccgatcgccaagacc
acctgcgccatcggtgaaatctccctgaccggccaagtgcgcccggtcccccagctggcc
caccgcttgagtgaggcggcccgcctgggcttcacccgcgccgtcgtccccgtccaccgg
ggcggccgcgcgaccaagccctccgccggtttagaggtcatcgaagtctccaccttggcc
gacgccttggaagccctaggcgcgcgttaa
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