Bifidobacterium actinocoloniiforme: AB656_06580
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Entry
AB656_06580 CDS
T04036
Name
(GenBank) helicase
Organism
bact
Bifidobacterium actinocoloniiforme
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ResIII
ERCC3_RAD25_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKV56202
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Position
1611298..1614966
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AA seq
1222 aa
AA seq
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MDVVSEAELKRLGRGSFFRAYEVVQSKRLQGMACRAHARELALSASVVNSYEYADDYQVK
ARVDLDKATVVDSSCTCPAFGRLGAVCKHVIALVMLYNDSPELFEQTGQAQRPVQRRTSR
RLLDFMDQASEEQRQRKRKRQVELLKVVGAESEADQAHSGGGLGSVHLPIGSVSLRPSLS
CEGGDWGLRLRVTVPSRHISYLAKDVDELLQAVDHSLYYCYGRKLGFVHSRDSFDQASKG
LLDILQRGVQIRSSGQEGVIGYYRQHKGPLTEMTLSEEEVCDILDLYVGSDSTLDYAPGG
RPNAQARPAQVVDGDPDLGLSVEPAGEGGDRAGQGYLIRRKLTVDRFIGGHHSSFVVAWP
VGGDPLFETNPTIYRCSHAFAAHSELVSALCAPGSDSDEGNGQGQGLFLDSSDLETFSRT
VLPALSPAAPASQEAEGDGGGSASDTVVPAAQDGASGTGKGAIRATLPPELLDLRRLPCV
IEIYLDRDADGVTCDLQARYGESRFHVFAGIGAHEPVVRDKSAERLAVEAARHYFPEPQG
VLARIPESDDKAIYKLLTEGLPVLRSLGEVYSTPAFDGLSADSHPTIRLGLSVKSGLVEI
SPIADEIAPEEVPALLESYRRKQRYHRLKNGAFVNLAQADMSALDEAEADLGLKPGSLEA
GPVTVPAYEAYYWDAQVEEDHKDEEFKRYIRDLKQVDPSRYRLPAELKGVLRPYQEEGFR
WLSSACDKGFGGILADEMGLGKTVQLLAFLASRQQEARRVGPSLIVCPASLVYNWAAECA
KFVPSLKVAPVAGGKEGRRRVLAQAGDCDLLITSYDLLRRDIEDYKGLKLYCVALDEAQY
IKNHATKSAQAVRKLDARQRFALTGTPIENRLAELWSIFDFLMPGILGSYRRFRERFELP
ILSGDENAQAKLQAFVGPFILRRRKADVLKDLPDKIENVITVQLQGEQRRIYAALEQGLR
MTLNKQRDVEFKNGKLQVLAQLTRLRQVCCDPRLLYSNVGEGVPEAASAIAREAASPQAF
GKPAEVEQMASERLEQAAEQARRAPRKIPSAKLDAIEELVGSCRDAGRKMLIFSQFTSYL
DLIAERLRADGVDYKVITGATPKRKRLELVDSFNEDDTPVFLISLKAGNTGLNLTGACVV
VHADPWWNAAAQEQANDRAHRIGQTQDVNVYQIVAKDTIEERILGLQKSKSDLASRFVDS
TSSTNGTSISSLTRDDLLSLLG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
ctggacgtggtgtcggaggcggagctcaagcgcctgggtcgcggctccttcttccgagcc
tacgaagttgtccaatccaagcgcttgcaaggcatggcctgccgggcccacgccagggag
ctggccctgtcggcttcggtggtcaactcctacgagtacgcggacgactaccaggtcaag
gcacgggtggacctggacaaggccacggtcgttgactcctcctgcacctgcccggccttc
gggcgcctgggggccgtctgcaagcacgtgatcgcgctggtcatgctctacaacgactca
cctgagctcttcgagcagaccggccaagcccagcggccggttcagcgccgcacgtcccgg
cgcctgctcgacttcatggatcaagctagtgaggaacagcgccagcgcaagcgcaagcgg
caggtggagctgctcaaggtcgtgggggccgagagcgaggcggaccaggcccattcgggc
ggcggtctcggttccgtccacctgccgatcggcagcgtaagcctgcgcccctccctctcc
tgcgaaggcggtgactgggggctgcgtctgcgggtcaccgtcccctcccgccacatctcc
tacctggccaaagacgtcgatgagctcctccaggcggtggaccactccctctactactgc
tacgggcgcaaactggggttcgttcactcccgcgacagcttcgatcaggcctccaagggc
ctgctcgacatcctccagcggggcgtccagattcgctccagcggacaggagggcgtgatt
gggtactaccggcagcacaaggggcccttgaccgaaatgaccctgtccgaagaagaggtc
tgcgacatcctcgacctctacgtcggcagtgattcgaccctggactacgcgccaggcggc
aggcccaacgcccaagcacgcccggcccaggtcgtggacggggacccggacctcggcctg
agcgtggagcccgccggcgagggcggcgatcgcgccggccaagggtacctgatccgccgc
aagctgacggtcgaccgattcatcggcggccaccactcttcctttgtggtggcttggccc
gtggggggcgaccccctcttcgagaccaacccgaccatctaccgttgctcccatgccttc
gcggcccacagcgagctggtcagcgccctgtgcgcccctggctccgacagcgacgagggc
aacggtcaaggtcaggggctcttcctggattccagcgacttggagaccttcagccgcacc
gtcctgcccgcgctgagccctgcggctcccgcctcccaggaggccgagggcgacggcggg
ggcagcgcctccgataccgtcgttcccgcggcccaagacggggcttccggcacggggaag
ggagccatccgcgcaaccctgccccccgagctcctggacctgcgccgcctgccgtgcgtg
atcgagatctacctggaccgtgacgccgacggcgtgacctgcgaccttcaagcccgctac
ggtgagagccgcttccatgtcttcgctgggatcggcgcccacgagccggtcgtgcgcgat
aagtcggccgaacgcctggccgtggaggccgcccgccactacttccccgagccccagggc
gtcctcgcccgcatccccgagtcggacgataaggctatttacaagctgctgaccgagggg
ttgcccgtcttgcgcagcctgggcgaggtctactccacaccggccttcgacgggctgagc
gccgactcccaccccacgatccggctgggcctgtcggtcaaatcaggcctagtggagatt
tcgccgatcgccgacgagatcgctccggaggaagtgccggccctgctggagagctaccgg
aggaagcagcgttaccaccggctcaagaacggagcgttcgtgaacttggcccaggccgat
atgtccgcattggacgaggccgaggccgacctggggctcaagccgggctccttggaggcc
gggccggtaacggtgcccgcctacgaggcctactattgggacgcccaggtggaggaggac
cacaaggatgaggagttcaagcgctacattcgcgacttgaagcaggtggacccctcccgt
taccggttgcccgccgagctcaaaggggtcctgcggccctaccaggaggagggattccgc
tggctgagctcagcctgcgacaagggcttcggcggcatcctggccgatgaaatgggcctg
ggtaagaccgtgcaactcctggccttcctggcctctcgccagcaggaggctcgccgggta
gggcccagcctgattgtgtgcccggcctcgttggtctacaactgggctgctgagtgcgcc
aaattcgtcccctccttgaaggtggcgccggtggccggcggcaaggaggggcgtcggcgg
gtgctggcccaggccggcgactgcgacctgctgatcacctcctacgatctgctgcggcgg
gacatcgaggactataagggcctgaagctctactgcgtggccttggacgaggcccagtac
atcaagaatcacgccaccaagtccgctcaggccgtgcgcaagttggacgcccgccagcgc
ttcgccctgaccggcaccccaatcgagaatcgcttggccgagctctggtccatcttcgac
ttcctgatgcccggcatcctgggctcctaccggcgcttccgcgagcgcttcgaactgccg
atcctgagcggcgacgagaacgcccaggccaaactccaggccttcgtggggcccttcatc
ctgcgccggcgcaaggcggacgtgttgaaggatctgcctgacaagatcgagaacgtgatc
accgtgcagcttcagggcgagcagcgcaggatttacgccgccctggagcaggggctgagg
atgacgctgaacaagcagcgcgacgtggagttcaagaacggcaagctccaggtcctggcc
caactgacccgcctgcgccaggtctgctgcgacccccgcctgctctactccaacgtgggc
gagggtgtgcccgaggcggcttcggcgatcgctcgggaggccgcgagcccccaggctttc
ggcaagccggccgaggtggagcagatggcctccgagcgcctggagcaggcggcggagcaa
gcccggcgcgccccccgcaagattccctcggccaagttggacgcgatcgaggagctggtg
gggtcctgccgggacgcgggccgcaagatgctgatcttctcccagttcacctcctacctg
gatctgatcgccgagcgcctgcgcgccgacggggtggactacaaggtcatcacaggcgcc
acccccaagcgcaagcgtctggagttggtggactcctttaatgaagacgacaccccggtc
ttcctgatatcccttaaggccggcaacaccgggctcaacctgaccggcgcatgcgtggtg
gtgcatgcggacccttggtggaacgccgccgcccaggagcaggccaatgaccgcgcccac
cggatcgggcagacccaggacgtcaacgtttaccagatcgtggccaaggacacgatcgag
gagcggattctgggcctgcagaagagcaagtccgatctggcctcgcgtttcgtggactcc
acttcatccaccaacgggacctcgatctcctcgctgacccgggacgacctgctctcgctc
ctgggttga
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