KEGG   Bifidobacterium actinocoloniiforme: AB656_06700
Entry
AB656_06700       CDS       T04036                                 
Name
(GenBank) CRISPR-associated protein Cse1
  KO
K15342  CRISP-associated protein Cas1
Organism
bact  Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:bact00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bact03400]
    AB656_06700
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bact02048]
    AB656_06700
DNA repair and recombination proteins [BR:bact03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     AB656_06700
Prokaryotic defense system [BR:bact02048]
 CRISPR-Cas system
  Universal Cas proteins
   AB656_06700
SSDB
Motif
Pfam: Cas_Cas1 DUF6795
Other DBs
NCBI-ProteinID: AKV56208
LinkDB
Position
1652405..1653388
AA seq 327 aa
MNSEDKGNTGQVRSRARAKSSGTPPPELGELVRVEDRLSFLYFEHCIVKREDNAITVSDS
EGTIHLPAANLSVLMLGPGTDVTHQAMTVIGENGATVIWVGERGVRMYAFGKPLTHSSIL
LQRQASLVSNVRSRLAVARRMYQMRFLNEDVSHLTMQQLRGREGARVRQVYRRYSQETGV
EWDKRTYDHEDFDQGSEINKALSAAHTCLYGIAHSVIVALGCSPGLGFVHVGHERSFVYD
IADLYKAELSIPVAFETAAQMPEDIGSAVRHNMRDAVYDLSLMSRMAKDIKDLLGEEAEL
PDADADHVGLWDDKVGEVAAGKSYGNE
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaacagcgaggacaaaggaaataccgggcaggttcggtcgcgggcgcgtgccaaatcc
tcggggactcctccgcctgaactcggtgagttggttcgagtcgaggacaggctgtctttc
ctttattttgagcattgcatcgtcaaaagggaggataacgccattacggtgtcggatagt
gaggggaccatccacttgccggcggcgaacctcagcgtgcttatgctcggtcccggtact
gacgtaacgcaccaggcgatgaccgtcatcggggagaacggcgccaccgtcatctgggta
ggggagcgcggtgtgcgcatgtatgcttttggcaagccgctcacccactcttcgatactg
ttgcagaggcaggcctccttggtttccaacgtgcgctcccggttggctgtggctcggcgc
atgtatcagatgcgtttcctcaacgaggatgtcagtcacttgaccatgcagcagttgcgt
gggcgggaaggcgctcgtgttcgtcaggtgtacagacgatattctcaggagacgggagtc
gagtgggataaacgcacctatgaccatgaggatttcgaccaggggagcgagatcaataag
gctttatcggcagcgcatacttgcctgtatggcatagctcattcggtcatcgtcgcactc
ggctgctctccggggttgggattcgtgcatgtcggtcatgagcgttcattcgtgtacgac
atcgcggatttatacaaggccgaattatcgataccggtcgccttcgagaccgctgcgcaa
atgccggaggatatcggctctgcggtacgtcataatatgcgggacgctgtctacgacttg
tcgcttatgtctcggatggctaaggacattaaggatttgctgggagaagaggctgagctg
cccgatgctgacgcagaccatgtgggactgtgggacgataaggtcggggaagttgcagct
gggaagtcttatgggaatgaatga

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