Bifidobacterium actinocoloniiforme: AB656_07275
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Entry
AB656_07275 CDS
T04036
Name
(GenBank) ATP-dependent DNA helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB656_07275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_07275
Enzymes [BR:
bact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB656_07275
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB656_07275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_dom3_C
ResIII
AAA_16
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AKV55968
UniProt:
A0A086Z264
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All DBs
Position
1774981..1777539
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AA seq
852 aa
AA seq
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MEKGPAVSLDSAVSALLPNKRRVSALKSLGITTVGEALTYYPFRVSEPVPVLPIRSVRLG
SPVAFAARVKWARVVPMGSKRGLRLDVLVSDEDFAASCGVASSSARLVFFSHRKSYIDWM
SLRLRPGARVVLAGEPSVFNGQLQFTHPDVLLLPEAGGGEGGADPLPGSIRPDADSQEQA
LAKVSRPRPVYHANSRISSDHIHDAILGFIRLLARAHGGGTALGEQAQGATLGTAQSASQ
GQPFEGEMEPAIDAEAFGRAVPDILPESARVNGHYLHRAQAFLGMHDPGAVEDFREALRT
LRFEEAFVSQTALLRSREDSRRVRAYPCPQPGQDSLVTRFVDSLPFRLTQGQEEVIGRIG
GDMARDYPMQRLLQGEVGSGKTVVALAAMLQAVDAGFQAVLVAPTQVLAEQHFESIGRML
QALAASGPAASAGTEPSGGADASEGQSKPEHVNEAGQVPLVLLTGGMRLAERRRALAIPA
SGRPCIVVATHAAFSKTFQAPHLALAVIDEQHRFGVEQREALRRKSERSPHLLVMTATPI
PRTAAMTWFGDLDISSLTELPGGRKPIRTFVVPEADGPTMAAMFLHIRERVQAGERAYIV
CPRIDEDEEGAQTGSGAKRKGSARRSAEGDLPEIDPYAQADAEGAEPKPRLHSVEEMSHR
LAALPQFQGISMATLTGRDDDETKNQVMADFSSGKTQVLVSTTVIEVGVDVPQASQIVIF
DADRFGLSQLHQLRGRVGRGGTDSWAFLVSRAESDSLAAQRLEVIRASTDGAEIAQADIE
MRGAGDVLGDAQSGGRSSLKLLRVVKDAKMIAQAREQAEGLLKQDPELKGHVELAGAALD
FTRGNETFLTST
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggtccggctgtcagcctggatagcgcggtctctgcgctactgcccaacaaa
cggcgggtcagcgcgctcaaatccctgggaatcacgaccgtgggggaggctctgacctac
taccctttccgggtgagcgagccagtgccggtgctgccgattcggtccgtgcgcctgggc
tcaccagtggccttcgcggcccgggtgaagtgggcgcgggtggtgcctatgggaagcaag
cggggcctgcgcctggacgtgctggtcagcgatgaggacttcgcggcctcgtgcggggtg
gcctcgtcctcagcccgcctggtcttcttctcgcaccgtaagtcctacatagactggatg
agcctgcgcctgcgccccggcgcccgggtcgtgctggctggcgagccctccgtcttcaac
ggccagctgcagttcacccacccggacgtcctcctgctgcctgaggcgggcgggggcgag
gggggcgccgaccctctgccgggttccattcgacctgacgcggactcccaggaacaggcc
ctggccaaggtctcgcggcccagaccggtctaccacgccaactcccgcatctcctcagac
cacatccatgacgcgattctgggtttcatccgcctcctggcccgggcccacggcggcggg
acggctctgggggagcaggcccaaggcgcgaccctcggcacagcccagagcgcgagccag
gggcagcccttcgaaggcgagatggaaccggcgatcgacgctgaggctttcggccgggct
gtgcccgatatcctgcctgaatcggcgcgcgtcaacgggcactacctccaccgggcccag
gccttcctggggatgcatgaccccggcgctgtggaggacttccgcgaggccttgcggacc
ctgcgcttcgaggaggccttcgtctcccagacggccctcctgcgcagccgcgaggactcc
cggagggtccgtgcctacccctgcccccagccgggccaggattccttggtcacccgcttt
gtcgactcgctgccctttcgtctgacccagggccaggaagaggtcatagggcgcatcggg
ggcgacatggcccgtgactacccgatgcagcgcctcttgcaaggcgaggtgggctcaggc
aagaccgtggtcgccctggccgccatgcttcaggccgtggacgccggtttccaagccgtc
ttggtggcgcctactcaggtcctggccgaacaacacttcgaatcaatcggccggatgctc
caggccctggccgcctccggccctgccgccagcgccggcaccgagcccagcggtggcgcg
gacgcaagcgagggccagtccaagcctgagcacgtaaacgaggcgggccaggtgccgctg
gtcctgctgaccggcggcatgcgcctggccgagcgtcgccgggccttggcgatccccgct
tccggacggccctgcatcgtcgtcgccacgcacgctgctttctccaagaccttccaggcc
ccccaccttgccctcgccgtcatcgacgaacagcaccgcttcggcgtcgagcagcgcgag
gccctgcgccgcaagtccgaacgttccccccacctgctggtcatgaccgccacgccgatc
ccgcgcaccgccgcgatgacgtggttcggcgacctggacatctcttcgctcaccgagctg
cccggcggccgcaaacccatcaggaccttcgtggttccggaggcggatggccccactatg
gcggccatgttcctgcacatccgcgagcgggtccaggctggggaacgggcctacatcgtc
tgcccccgcatcgacgaggacgaggagggcgctcaaaccgggtctggcgccaagcgcaag
ggctccgcccgccgttcggctgagggcgacctgccggagatcgacccgtacgcccaggcg
gatgctgagggcgccgaacctaagcctcgcctgcattcggtggaggagatgagccatcgc
ctggccgcgctgccccagttccagggcatcagcatggccaccctgaccggtcgcgacgat
gatgagaccaagaaccaggtgatggcggacttctcatccggcaagacccaggtcctggtt
tccaccaccgtcatcgaggtgggcgtggatgtgccccaggcttcgcagatcgtcatcttc
gacgccgaccgattcggcctgtcccagctccaccaattgcgcggccgggtggggcgcggc
ggcaccgacagctgggccttcctggtctcgcgcgccgaatccgattccctggccgcccag
cgcctggaggtcatccgtgcatcaaccgacggggccgagatagcccaggccgacatcgag
atgcgcggcgcgggcgatgtgctgggcgacgcccagtcgggcggccgttcatcgctgaag
ctcttgcgcgtggtcaaggacgcgaagatgatcgcccaagcccgggaacaagccgagggg
ctcctgaagcaggacccggagcttaagggccatgtggagctggcgggcgcggccctggac
ttcacccggggtaatgagaccttcctgacctccacctga
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