Balaenoptera acutorostrata scammoni (minke whale): 102997149
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Entry
102997149 CDS
T03086
Symbol
COL19A1
Name
(RefSeq) collagen type XIX alpha 1 chain
KO
K24340
collagen type XIX alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102997149 (COL19A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
102997149 (COL19A1)
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102997149 (COL19A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102997149
NCBI-ProteinID:
XP_007166744
UniProt:
A0A383YVL3
LinkDB
All DBs
Position
Un
AA seq
1126 aa
AA seq
DB search
MIDNVVKILNTFFLLTEKQCPILRKEGHQFTPDYRDKVEVAGFDLGERFSLRRVFCEGDK
TCFKLGSSLLIRDTIKVFPKGLPEEFAIAAVFRVRRSTKKERWFLWQVLNQQNMPQVSIV
VDGGKKMVEFMFRAVEGDVLNYIFKNRELRPLFDRQWHKLGFSVQSRAISVYTDCNLVAS
RHIDGKGAVDFHGRTVIAARASDGKPVDVEIHQLQIYCNSSIVAQETCCEISDPKCPEQH
GFASTAASLVPAHASRMSAFLPAKQELTDQCQCIPHKGEAGLLGVPGSPGQKGDKGEQGE
NGLHGTPGLPGQKGEQGFEGSKGEIGEKGAQGEKGDPGLAGVNGQDGLKGDVGRHGPPGP
KGEKGDMGPPGPPALTGSLGIQGPQGPPGKEGQRGRRGKPGPPGKPGPPGPPGPPGIQGM
QQTPDGYYHKGNLGEHGAGGPKGEKGEIGPPGFPGSIGPKGEKGESGEPFTKGEKGDRGE
PGITGSQGIKGEPGDPSPPGVIGSPGLKGQQGPAGPMGPRGPPGDTGLPGEHGIPGKQGI
KGEKGDPGGMIGPPGLPGPKGEAGPPGKSLPGEPGSDGNPGAPGPRGPKGERGLPGIHGS
PGDKGPPGVGIPGRTGSQGPAGEPGIQGPRGLPGLPGAPGTPGNDGAPGRDGKPGLPGPP
GDPIALPLLGDMGALFKNFCGNCQASVPGLKSNKGEEAGTGEPGQFDSVARKGDVGPRGP
PGVPGREGPKGSKGERGYPGIPGEKGNEGLQGVPGLPGAPGPTGPPGLLGRTGHPGPSGT
KGDKGSEGPPGRPGPPGPPGVPFNEGNGMSSLYKIQGGVNAPSYPGPPGPPGPKGDPGPV
GEPGAMGLPGLEGFPGIKGDRGPAGPPGVAGISGKPGAPGPPGIPGEQGERGPVGDIGFP
GPEGPAGKPGINGKDGLPGVQGIMGKPGERGPKGERGDQGIPGDRGPQGERGKPGLPGIK
GDIGPMGPPGNKGSPGSPGHQGLPGHPGLPGSPADMVSFEEIKKYINQEVLRIFEERMAV
FLSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGLGLPGSPGL
PGTSAPGLPGLPGAPGPQGPAGPSGRCNPGDCLYPVSHARQQTGGK
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgatagacaatgtagtgaaaattctcaataccttttttcttttaacagaaaaacaatgt
cctatactgaggaaagagggacaccagtttacaccagactacagagataaagttgaagtt
gcaggttttgacctaggagagcgcttttctctgagacgtgtgttttgtgaaggtgataaa
acttgcttcaaattgggaagttcacttcttattagagacaccattaaggtgtttcccaaa
ggccttcctgaggagttcgccatagcagccgtgtttcgggtacgaagaagcaccaaaaag
gaacggtggtttctgtggcaggttttaaaccagcagaatatgccacaggtttctatagta
gttgatggtggaaagaagatggtggaatttatgttccgagctgtggagggagacgtgttg
aactacatttttaaaaatcgagaactccgtcctttgtttgatcgtcagtggcataaactt
ggcttcagtgtacaatcccgggccatctcggtctatacagactgtaacttagttgcaagc
cggcatattgatggaaagggcgctgtggacttccacggaaggactgttattgcggcccga
gcttcagatggcaagcctgtggacgttgaaattcaccaacttcaaatctactgtaactcg
agcatcgtagctcaagaaacgtgttgtgagatatcagaccctaagtgcccagagcagcat
ggctttgcaagtactgcagcatcattggtacccgctcatgccagtagaatgtctgcattt
ctgccagcaaagcaggaacttacagaccagtgccagtgcattccacacaagggagaagca
ggattactgggagttccaggctcacctggacagaaaggggacaaaggagagcagggcgaa
aatggtttacatggaactccaggcttacctggtcaaaagggagagcaaggttttgaaggt
agcaaaggagaaattggtgaaaagggtgcacaaggagaaaaaggagatccaggtttggcc
ggagttaatgggcaagatggtttgaaaggtgacgtgggtcgtcatggtccacctggccca
aaaggagaaaagggagatatgggacctccaggaccgccagccttaactggctccctgggg
atccaaggcccccaaggtccacctggaaaagagggtcagaggggaagacgaggaaaacca
gggcctccaggaaaaccagggcctccaggaccacctggacctcctggaatacaaggaatg
caacagactcctgatggatattatcacaagggaaaccttggtgagcatggagctggtggc
ccaaaaggagagaagggtgaaattggaccaccaggatttccaggctctattggccctaaa
ggtgaaaaaggagaatctggggaaccctttacaaaaggtgaaaagggagacagaggagaa
cccggaataacaggatcacagggaataaagggcgagcctggagatcctagtccccctggt
gtaataggaagcccaggactaaagggtcagcaaggacccgcaggccctatgggacccaga
ggaccaccaggagatactggattgccaggagaacacggtatcccaggaaaacaaggcatt
aagggagaaaagggagacccaggtgggatgataggccctcctggacttccaggtccaaaa
ggtgaggctggtcctccaggaaaaagcctgccaggggaaccaggatcagatggaaatcct
ggagcacctggtccgcgagggccaaagggagaaagagggctgccaggtatccacggctcc
ccgggtgacaaaggccccccaggggtaggaattcctggccgaactggctcccaaggccca
gctggagagccagggattcagggtcctcgaggtctccctggattgccaggagctccaggg
accccagggaatgatggagctcctgggagggatggaaagccaggtctgccaggcccccca
ggtgacccgattgcacttcctctcttgggagacatgggggccttgttcaagaacttctgt
ggcaactgccaagccagtgtccctgggctgaaaagcaacaaaggagaagaagcaggcact
ggtgagcctggacagtttgattctgtagcccggaagggcgatgtagggccacggggtcct
ccaggagtcccaggcagagagggaccaaaggggagcaaaggagaacgaggctaccccggg
atacctggggagaaaggcaatgagggtcttcaaggcgttccgggccttccaggtgctcct
ggcccgactggaccccctggcttgttgggaagaacgggacatccgggtccctcgggaaca
aagggtgacaagggcagcgagggaccccctgggagacccggaccacctggaccacctggt
gtaccattcaatgaaggaaatggaatgagcagtttatataaaatccagggaggtgtgaat
gctcccagttatccagggccacctggcccccctggccccaaaggtgatcctggcccggtg
ggagaacctggtgcaatggggttgccaggattagaaggatttcctggtataaagggagat
cgaggcccggcaggtccccctggagtggctggaatctcggggaaacccggagccccaggc
cctccaggaatcccaggagaacagggtgagagagggcctgttggagacataggattccct
ggaccagaaggacccgcaggaaagcctggaataaatgggaaagatggattaccaggtgtg
cagggcatcatgggtaagcctggagagagaggccccaaaggagaacggggtgatcaggga
attccaggagaccgaggcccacaaggtgaacgtggaaaaccaggccttccaggcataaag
ggggacataggccctatggggcccccaggaaataagggctccccgggatccccagggcac
caaggccttccaggccaccccggcctccccggctccccggctgatatggtttcatttgaa
gaaataaagaagtatattaatcaagaggttctgaggatttttgaagagaggatggctgtg
ttcctgtcccagctcaagctaccagcagcaatgctggctgctcaagctcacgggaggcct
ggtccaccaggaaaggatgggttacctgggccaccaggagaccctgggccccaaggctac
cgaggacagaagggagaaagaggggaaccgggattggggcttccagggagcccaggtctt
ccagggacctcagctccgggcctgccaggcttaccaggtgccccagggccccagggcccc
gcaggacccagtggaaggtgtaacccaggagactgcctgtatcccgtctctcacgcccgt
cagcagacaggtgggaaataa
DBGET
integrated database retrieval system
