Balaenoptera acutorostrata scammoni (minke whale): 102997446
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Entry
102997446 CDS
T03086
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04622
RIG-I-like receptor signaling pathway
bacu05161
Hepatitis B
bacu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102997446
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102997446
09172 Infectious disease: viral
05161 Hepatitis B
102997446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
102997446
03041 Spliceosome [BR:
bacu03041
]
102997446
03036 Chromosome and associated proteins [BR:
bacu03036
]
102997446
Enzymes [BR:
bacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102997446
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102997446
mRNA cycle factors
Common to processing body (P body) and stress granule
102997446
Spliceosome [BR:
bacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102997446
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102997446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102997446
NCBI-ProteinID:
XP_007187248
LinkDB
All DBs
Position
Un
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGIYNKDSSGW
SSSKDKDLYSSFGCRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDSIGSRGERGGFGKYE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGPSSSSFGSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttctgataatcagagtggaggaagtaccgccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggtatctacaataaagacagttcagggtgg
agttctagtaaagataaggatttatacagcagttttggttgccgtagtgattcaagaggg
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaggtgactatgacagcattggcagccgtggtgaaagaggtggctttggaaaatatgaa
cgtggcggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccgccaagtgaacgcttggaacaagaacttttttctggaggcaacaccgggattaacttt
gaaaaatacgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaa
agtttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgctac
actcgtccgactccagtgcaaaagcatgctattcctattatcaaagagaagagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcatttcttttgcccatcttgagt
cagatttattctgatggtccaggcgaggctttgagggccatgaaggaaaatggacggtat
gggcgccgcaaacaatacccaatctccttggtgttagcaccaactagagaattggctgta
cagatctacgaggaagccaggaaattttcataccgatctagagttcgtccttgcgtggtt
tatggtggtgctgatattggtcagcaaattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggaaagagggaagattggattagacttc
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgagcctcaa
atacgtaggatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatg
tttagtgctactttcccgaaggaaatacagatgcttgctcgtgatttcttggatgagtat
atctttctggccgtaggaagagttggctctacctctgagaacatcacacagaaagtagtc
tgggtggaagagtcagacaaacggtcatttctgcttgaccttctaaatgcaacaggcaaa
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctagaggatttc
ttgtaccatgaaggatatgcctgtacgagtatccatggagaccgatctcagagagataga
gaagaggctcttcatcagttccgctcaggaaaaagcccgattctagtggctacagcagta
gcagcaagaggactggacatttcaaatgtgaaacatgttatcaattttgacttgcccagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtcggaaaccttggcctt
gccacctcattctttaatgagaggaacataaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatccaaaagtagtagattcagtggaggatttggtgccaga
gactatcgacagagtagtggtcccagcagttccagctttggcagcagccgcgccagcagc
agccgcagtggtggaggcggccatggcagcagcagagggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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