Balaenoptera acutorostrata scammoni (minke whale): 102998256
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Entry
102998256 CDS
T03086
Symbol
PRPF8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102998256 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bacu03041
]
102998256 (PRPF8)
Spliceosome [BR:
bacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102998256 (PRPF8)
Complex C
U5 SnRNP specific factors
102998256 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
102998256
NCBI-ProteinID:
XP_007183861
UniProt:
A0A384A931
LinkDB
All DBs
Position
Un
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggccctctagccccg
ctgccagactacatgtcggaggagaagcttcaggagaaagcccgaaaatggcagcaattg
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgctcaaaaggaagac
atgcctccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtgtacttgggtgccctaaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcctttgtcaatgagattccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcctttggactatgctgac
aacatcctagatgttgagccactggaggccattcagctagagctggaccctgaggaagat
gcccctgtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggttccacttaccaacgctggcagttcacactgcctatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaattacttctatctgtttgatctg
aaggccttttttacctccaaggcactcaatatggccattcctggaggccccaaatttgag
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcatcatccggcagcccatccgcactgagtacaagattgcttttccttacttgtac
aacaaccttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactctgtcaagagtcaggaaccattgccagatgacgacgaggagtttgagctc
ccagagtttgtggagcccttcttgaaagacacacccctctacacagacaatacagccaat
ggcattgccctgctttgggccccacggcccttcaacctacgctctggtcgcacgcgccgg
gccctagacattcctcttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcgcaaaagaagaggtatctgttccgttccttcaaagccaccaaa
ttctttcagtctacaaagctggactgggtggaggtggggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcacctggactac
aacttcaacctcaagcccgtcaagacgctcaccaccaaggaacgaaagaaatctcgtttt
gggaatgctttccatctgtgtcgagaggttctgcgcttaactaagctggtggtggacagt
catgtgcagtatcggttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcgcacgtggggcagctgacgggcatgtaccggtacaaatataagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggcccg
gtagggaagggccctggctgcggtttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggtaacctcctggcccggcagttt
gaaggccgacactcaaagggggtggcaaagaccgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtccccggtttgccaacacctatagagaatatgatcctt
cgatatgtgaaggccaaggctgactggtggaccaacactgcgcactacaaccgagaacgg
atccgccgtggggccactgtagacaagactgtttgcaaaaagaacttgggacgcctcact
cggctctacctgaaggcagaacaagagcggcagcacaactacctaaaggacgggccttac
atcacagcagaagaagcggtggcagtgtataccaccactgtgcattggctggaaagccgt
aggttctcacccatcccattccccccactctcctacaagcacgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcgcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgccagtgtatgatgtggagccactggagaagataactgatgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacaagtgagggcgagtgcaacgtcatgctggagtcacga
tttgagaagatgtatgagaagatagatttgaccctgcttaatcggctgctgcgcctcatc
gtagaccacaacatagccgactacatgacagccaagaacaacgttgtcatcaactacaag
gacatgaaccatacgaattcatatggcatcattagaggcctgcagtttgcctcattcatc
gtacagtactatggcttggttatggatttgcttgtgttgggattgcaccgggccagtgag
atggctgggccccctcagatgccaaacgattttctcagtttccaagacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaaatgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgactacagttcagtgggagaacagcttcgtgtccgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggatttgagtgccgcatcctgcctaagtgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcgaacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacacagctcttattggccttatgacgtactttcgggaggctgtggtgaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgaatcaag
atcggcctcaactccaagatgccgagtcgcttcccgcctgtcgtgttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcatcccccaatctgaccta
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtatcgctacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgcgcagaac
agacgactgaccctagaagatctagaggattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacactggcttatgataagggttggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccctttttggtggacacaccagcggcat
gatggaaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacactctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaaactaaccaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtccccg
accatcaaccgagccaacgtatacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcacggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactggaaattgagacagtacaaaaggagacaatccacccccgaaagtcctat
aagatgaactcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactctaaggatgtgatggacagcaccaccactcagaagtat
tggattgacatccagttgcgctggggggactatgattcccatgacattgagcgctatgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccatcgacctggcctataacctgcatagtgcctatggaaactggttccct
ggcagcaagcccctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgtaaagggctgcagctttattcatctgagcccactgag
ccttatctgtcctctcagaactatggtgagctcttttccaaccagattatctggtttgtg
gatgacacgaatgtctacagagtgactatccataagacctttgaagggaacctgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
accgctgaggaggtggctgccctgatccgatctctgccagtggaggagcagcccaagcag
atcattgtcaccaggaaaggcatgctcgatccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccagctccccttccaggcttgtctcaaggtggaa
aagtttggggatctcatccttaaagccactgagccgcagatggttctctttaacctctat
gatgactggctcaagactatctcatcttacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaacaacgaccgggcgaaggtgatcctgaagccagacaagactacg
atcacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaggaccttatcttggctgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagatatcatcctgggtatggagatctcggcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggaacagtcacagctgact
gcaacccagactcgtactgtcaacaagcatggtgacgaaatcatcacctctaccaccagc
aactatgagacccagactttctcatctaagactgaatggagggtcagggccatttctgcc
gccaacctgcacctaaggaccaatcacatctatgtttcatctgatgacatcaaggagact
ggttatacctatattcttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcagggtacctctatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccagactgtgcacctgcct
ggccagctgcctcagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgaatccccccagctgtcaccccaggatgtcaccacccatgccaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcaccctgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctaccctcgcactacgagagggtccag
atgctactgtcagaccgcttccttggcttctttatggtccctgcccagtcctcatggaac
tacaactttatgggtgttcggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcacagaccttcccacttcctcaactttgctctcctg
caggagggcgaggtctactctgcggaccgagaggacctctatgcctag
DBGET
integrated database retrieval system
