Balaenoptera acutorostrata scammoni (minke whale): 102998427
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Entry
102998427 CDS
T03086
Symbol
COL15A1
Name
(RefSeq) collagen type XV alpha 1 chain
KO
K08135
collagen type XV alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102998427 (COL15A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bacu00535
]
102998427 (COL15A1)
Proteoglycans [BR:
bacu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102998427 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102998427
NCBI-ProteinID:
XP_007197114
UniProt:
A0A384BBQ6
LinkDB
All DBs
Position
Un
AA seq
1371 aa
AA seq
DB search
MAQRRDTQCWRLLWLLSISALLPAVTRTRSATELASRGHLDLTELIGVPLPSSVSFVTGY
GGFPAYSFGPGANVGRPARTLIPPTFFRDFAISVMAKPSSARGGVLFAITDAFQKVIYLG
LRLSGVEDGGQRVILYYTEPGSKVSREAAAFPVPVMTHRWNRFAMVVQGEEVTLLVDCEE
HSHVPFPRSSRALAFEPSAGIFVGNAGATGLERFTGSIQQLTVHPDPRTPEELCEAEESS
ASGEASGLQETERVAEILEAITYTQAPSREARVGPINTPPTLSSPSEDAELSGEPVPERA
QETTNMSAIPHSSPKQGSGEILNDTLETVDTVDGSPITDTGSADGAFLHVTEEGPHMEEG
VAATAAAGEAEVSISTAREAEAGSVPTEGLTLSMSTERPGEGVTLGPDNEEXXXXXXXAA
TAAGEAEAPVSSAGEAEASSVPTGGLTLSMPTQDPGEGVTLGPISEESLTIAAAAAKVPL
STFEEEEASGFPTDGLVPLTPTAAPKQVVTSGPGDEDLAAATTERPLPAAGAEELGGALP
EAPPLPIPTVAPERGVPPGEAGEGLPGPLGPAGPTVGVEAEGSSLGWGLDVGSGDPVRSE
ELLRGPPGPPGPPGLPGIPGKPGTDVFTGPPGSPGEDGPAGEPGPPGPEGKPGLDGASGL
PGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKNGQVGAPGVMGPPGPPGPPGPQGPGCA
MGLGFEDTEGSGSVRLLPEPGISGPTASSGPKGEKGDQGAKGERGMDGASVVGPPGPRGL
PGRIEVLSSPLINITHGFMNLSDIPELVGPPGPEGMPGLPGFPGPRGPKGDTGVPGFPGL
KGEQGEKGEPGAILTGDIPLERLRSQKGEPGERGAPGQMGPRGPPGHKGEFGLPGRPGRP
GLNGLKGTKGDRGVMMPGPPGLPGPPGPPGPPGAVINIKGAVFPVPVRPHCKTPVGTTYP
GNSELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPVDPAYLRHFLNSLKGENRDRG
IKGEKGDSDSGFSESGPPGLPGSPGLAGQKGETIVGPQGPPGAPGMPGPPGFGRPGSPGP
PGPPGPAGPPAILGAAVAIPGPPGPPGQPGLPGSRNLVTAFSSMADMLQKAHLVIEGTFI
YLRDSTEFFIRVRDGWKKLQLGELIPIPDDSPPPPALSSNSHQLQLPLTSVSSVNYDSPA
LHLVALNTPFSGDIRADFQCFQQARAAGLLSTYEAFLSSHLQDLSTVVRKEERYSLPIVN
LKGQVLFNNWDSIFSGHGGQFNTHVPIYSFDGRDVMTDPSWPQKVVWHGSSTHGVRLVDQ
YCEAWRTADMAVMGLASPLSTGKILDQKAYSCANRLIVLCIENSFMTDVRK
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaggagggacacgcagtgttggcgcctgctgtggctgctttccatctccgcg
cttctccccgctgtcacccggacccgctccgcgacagaattggcttcccggggccacctg
gacctcacagagctcatcggcgtcccgctgccctcgtccgtgtcctttgtcactggctat
ggtggcttcccggcttacagcttcgggcctggtgccaacgtcggccgcccggccaggacc
ctcatcccacccaccttcttcagggactttgccatcagcgtgatggcgaagcccagcagt
gcccgaggcggcgtgctctttgctatcacagatgccttccagaaggtcatctacctgggc
ctgcggctctcaggagtggaggacggcggccagcgggtcatcctctactatacggagccc
ggctccaaggtgtcccgtgaggcggctgccttcccggtgcccgtgatgacccacaggtgg
aaccgctttgccatggttgtccagggcgaggaagtgaccctccttgtggactgcgaggag
cacagccacgtccccttcccgaggtcctcccgggccttggccttcgagcccagcgcggga
atcttcgtcggcaacgcaggagccacggggctggagagattcactgggtctatacagcag
ctcaccgtccaccctgaccccaggactcccgaggagctgtgtgaagctgaagaatcctcg
gcatcaggagaggccagcgggcttcaggagacagagagagtagctgagatcttggaagcc
atcacctacactcaagccccgtctagagaagcaagagttggccccataaacacacctcca
accctgtcttctccctctgaggatgcagagctttccggtgaacctgtacctgagcgggcc
caggaaaccaccaacatgagcgccatcccgcacagcagccccaagcaagggtctggtgag
atcctgaatgacacactggagacagttgatactgtggacggttcccccattactgacact
ggctcggcggatggggccttccttcatgtcactgaagagggtccacatatggaagaaggt
gtggcagcaacagcagcagctggggaggccgaggtgtccatcagcactgccagggaagca
gaggccggcagtgtgcccaccgagggactgaccctctccatgtccaccgagcgccctggg
gaaggggtcactctgggtccagataacgaagaannnnnnnnnnnnnnnnnnncagcagcg
acagcagcaggggaggccgaggcgcccgtcagcagtgccggggaagcagaggccagcagt
gtgcccaccgggggactgaccctctccatgcccactcaggaccctggggaaggggtcact
ttgggtccaatcagtgaagaaagcttaacaatagcagcggctgcagcaaaagtgcccctc
agcacttttgaggaagaggaggccagcgggttcccgactgatggcctggttcccctcaca
cccacagcggcccccaagcaagtagtcacatctggtcctggtgatgaagacttagcagca
gccacgacagagcggccccttcccgcggctggggcagaagagttgggtggcgctctccca
gaggcgcccccgcttcccatacccacagtagctcctgaaagaggggtccctccgggtgaa
gctggagaggggcttcctggcccccttggacctgctggacccacggtgggagtggaggct
gagggctccagcctgggctggggcttggacgtcggctctggtgacccagtgcgcagcgag
gaactgttaagaggtcctccaggtcccccaggcccacctggcttacctgggattccagga
aaaccaggaactgatgttttcacgggaccccctggatcccctggagaagatggacctgct
ggtgaacctggtcccccgggcccagagggaaagcctggacttgatggagcctccggcctt
cctggaatgaaaggggagaagggagcaagaggacctaatggctcagttggtgaaaagggt
gatcccggcaacagaggcttaccaggacccccagggaaaaatggacaagttggcgctcct
ggggttatgggacccccagggccccctggaccccctgggccccaaggccctggatgtgca
atgggacttggatttgaggatactgaaggctctgggagcgtcaggctgttgcctgagccc
ggaatctctggaccaacggcttcaagtggtcccaaaggagaaaaaggagaccagggagcc
aagggtgaaagagggatggatggagccagcgttgtgggaccccctgggcccagggggcta
ccagggcgcatcgaggtcttatctagtcctttgatcaacatcacccatggattcatgaat
ctctcggacattcctgagctcgtcgggcctccgggccccgagggcatgcctgggctgcca
ggatttccaggacccagaggaccaaaaggtgacactggtgtgcctggatttccaggacta
aaaggagaacagggtgagaagggagagccaggcgccatcctgacgggggatattcctctg
gaaaggctgaggagccaaaagggtgaacctggagagcgtggagccccgggacaaatgggg
cccagaggaccaccaggacacaaaggagaatttggcctccctggacgacccggtcgccca
ggactgaatggcctcaaaggcaccaaaggagatcgaggggtcatgatgccgggcccacct
ggcctacctggtcctccaggccccccaggaccacctggagctgtgattaacatcaaagga
gccgtcttcccagttccagtccggccacactgcaaaacgccagttggtaccacgtatcct
ggaaattcagaactcatcacttttcatggtgttaaaggagagaaaggatcctggggtctt
cccggctcaaaaggagaaaaaggcgaccagggggcccagggaccaccaggccctcctgtg
gatccagcttacctgagacattttctgaacagcttgaagggggagaacagagacaggggg
atcaaaggagaaaaaggagactctgacagcggcttctctgagtcagggcccccgggcctg
ccgggaagtccaggcctggcgggccagaaaggggagaccatcgtcgggccccagggaccc
ccaggtgctcctggcatgcctgggccacctggctttgggagacctggttcccctgggcca
ccgggacccccggggccagcaggacctccggctatcctaggagcagctgtggccattcca
ggcccacccggccctccaggacagccagggcttcccggatccaggaacctggttacagca
tttagcagcatggctgacatgttgcagaaagcccatttggtcatagaagggacattcatc
tacctgagggacagcaccgagtttttcattcgtgtcagagatggttggaaaaaattgcag
ctgggagaactgatccccattccggatgacagcccaccaccccctgcgctttccagcaat
tctcatcagcttcagcttccactgacgtctgtttcaagtgttaattatgacagccctgca
ctacacttggtcgctctgaacacgccattttctggggacattcgagctgattttcagtgc
ttccagcaggccagggcagcaggactgctgtccacctacgaagcattcttatcctcccac
ttgcaagatctctctacagttgtgaggaaagaagagagatatagccttccaatagtgaac
cttaagggccaagtactttttaataattgggactcaattttttctggccatggaggtcag
ttcaatacacatgttccaatatattcctttgatggccgagacgtaatgacagatccttct
tggccccaaaaggtcgtttggcacggctccagcacccacggagtccgtcttgtggatcag
tactgtgaagcgtggcgaaccgccgacatggcagtcatgggcttggcctccccgctgagc
acggggaagattctggaccagaaagcatacagctgtgctaataggctaattgttctgtgt
atcgaaaacagtttcatgacagatgtgaggaagtaa
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