Balaenoptera acutorostrata scammoni (minke whale): 102999040
Help
Entry
102999040 CDS
T03086
Symbol
MSH6
Name
(RefSeq) mutS homolog 6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu01524
Platinum drug resistance
bacu03430
Mismatch repair
bacu05200
Pathways in cancer
bacu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102999040 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102999040 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
102999040 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102999040 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bacu03400
]
102999040 (MSH6)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102999040 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
Motif
Other DBs
NCBI-GeneID:
102999040
NCBI-ProteinID:
XP_007190110
UniProt:
A0A384ARW4
LinkDB
All DBs
Position
Un
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNDSKGPVGASSESAAAAATGASPSPGEDAAWSEAGPGPGPLA
GSTSRAEARNLNGGLRKSAAPAVPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSSKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEEMEAGATYASDKSEEENEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVAPKR
KRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHISGGCDDSS
RPTIWYHETLEWLKEEKRRDTHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEDDSSGHARVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSVETKMILKSSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDSGVMLPQVLK
GMTSESDSVGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVRAT
RPGAVFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPYVISDRLDAIEDLMVVPDRISEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVLCKIIGVMEEVIDDFKSKILKQVLTLQTKNPEG
RFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGK
STLMRQAGLLVVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKMTQSLRLFREVCLASERSTVDAEAVHKLLTLIEEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagccctgaataatgac
agcaaaggcccggtcggggcctcaagtgaaagcgccgccgccgctgccaccggggcctcc
ccttccccaggcgaggatgcggcctggagcgaggccgggcctgggccggggcccctggcg
ggctccacttcgcgggccgaggcgaggaacctcaacggagggctgcggaagtcggcagcc
cctgcggtccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttacccttggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaaggaaagtctgcccgagttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatatacaggttcaaagtcaaaggaagcccag
aaaggaggtcatttctacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattaagaggcttgaattggcagtgtgtgatgagccctca
gaaccagaggaggaagaagagatggaggcaggtgccacttatgcatcagataagagtgaa
gaagaaaatgaaattgagagtgaagaggaagtgaggccaaaggtgcaaggatctaggcga
agtagccgccagataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagt
ggagtaggggatagtgacagtgaaggcctggacagccctgtcaaagttgctccaaagagg
aagagaatggtaactggaaatggctccctcaaaaggaaaagttcaaggaaggaaatgccc
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgcccctcaaaattctgaatcccaagcccacattagtggaggatgtgatgacagtagt
cgccccaccatctggtatcatgaaactttagagtggcttaaggaggagaagagaagagat
acgcacaggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcctgag
gatttccttaattcctgtactcccgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttattggagtcagtgaactagggctggtattcatgaaaggcaactgggcccattctggt
ttccctgaaattgcatttggccgatattcagattccctggtccagaagggctataaagta
gcacgggtggaacagaccgagaccccggaaatgatggaggcacgatgccgaaagatggca
catatatctaagtatgatagagtggtgaggagggagatctgtagggtcattaccaagggt
acacagacctacagtgtgctggaaggtgacccctcagagaactacagtaagtaccttctt
agcctcaaagaaaaagaagatgattcttctggccatgctcgagtgtatggagtatgtttt
gttgatacctcgctagggaagttcttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactttagtggcacactatcctccagtacaagtcttgtttgagaaaggaaat
ctctcagtggaaactaagatgattctcaagagttcattatcctcttctcttcaggaaggt
ctgataccaggttcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacagacaagttaaatgaggacagtggggtgatgctaccccaggtgcttaaa
ggtatgacctcagagtctgattctgttgggttgacaccgggagagaagagtgaattggcc
ctctctgctcttggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcccttggattctgacacggtccgtgctaca
agacctggtgctgtctttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
aacaacttggagatttttctgaatggaacaaatggttctactgaagggaccctgttagag
aagattgatacttgccatactcccttcggtaagcggctcctaaagcaatggctttgtgcc
ccactctgtaacccttatgttatcagtgatcgtctagatgccatagaagacctaatggtt
gtgcctgacagaatctctgaggttgtagaccttctaaagaagcttccagaccttgagaga
ctactgagtaaaattcataatgttggctctcccctgaagagccagaaccacccagatagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtactatgtaaaattataggggttatggaagaagtcattgat
gactttaagtctaaaatccttaagcaggtccttactctgcagacaaaaaatcctgaaggc
cgctttcctgatttgactttagaactaaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgatcaggct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgtagt
cgaattggctgtaggaccatagtctactggggaattggtaggaatcgttaccagttggaa
attcccgagaatttcatcacccgtaatttgccagaagaatatgagttgaaatctactaag
aagggctgtaaacgatactggaccaaaacaattgagaaaaagttggctaatctgataaat
gctgaagaacggagagatgtatcattaaaggactgcatgcggcgactgttctataacttt
gataaaaattacaaggactggcaggctgctgtggagtgcatcgcagtgctggatgtctta
ttgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgtccagtaattctg
ttgccagaagaagatactcctccctttctagaccttaaaggatcacgccacccctgcatt
acaaagactttttttggtgatgactttattccaaatgacattctaataggctgtgaggaa
gaggaagaaaatggcaaagcttactgtgtgcttgttactggaccgaatatggggggcaag
tctacgctcatgagacaggctggcctactagttgtaatggcccagatgggttgttatgta
ccagctgaagtgtgtaggctcacaccaatcgatagagtgtttactagacttggtgcctca
gacagaataatgtcaggtgaaagtacgttttttgttgaattgagtgaaactgccagtata
cttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagaatataaag
tgtcgtacattgttttctactcactaccattcattagttgaagactattctcaaaatgtt
gcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagccag
gagactattaccttcctgtacaaattcattaaaggagcctgtcctaaaagctatggcttt
aatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaagca
agagaatttgagaagatgactcagtcactgcgattatttcgggaagtttgtctggctagt
gaaaggtcgactgtagatgctgaagctgtccataagttgctgactttgattgaggaatta
tag
DBGET
integrated database retrieval system
