Balaenoptera acutorostrata scammoni (minke whale): 103000816
Help
Entry
103000816 CDS
T03086
Symbol
ERCC8
Name
(RefSeq) ERCC excision repair 8, CSA ubiquitin ligase complex subunit
KO
K10570
DNA excision repair protein ERCC-8
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03420
Nucleotide excision repair
bacu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103000816 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
103000816 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bacu04121
]
103000816 (ERCC8)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103000816 (ERCC8)
Ubiquitin system [BR:
bacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103000816 (ERCC8)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103000816 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103000816
NCBI-ProteinID:
XP_007176128
UniProt:
A0A383ZLX5
LinkDB
All DBs
Position
Un
AA seq
396 aa
AA seq
DB search
MLGFLSARQAGLDDPLRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIDPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSKAKLWDVRRASGCLITLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFTVS
CGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILA
WIPSLYESVPDDEETSTRSQLNPAFEDAWSSSDEEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctagggtttttgtcggcacgacaagcgggtttggacgaccctcttcgccttcggaga
gcggagtccacacggagggttttgggactggagttaaacaaagacagagatgttgaaagg
atccatggcagtggagttaacacccttgacattgaccctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtgctttatgatcttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaaatac
agtgtggagactgtacagtggtatcctcatgacactggcatgttcacatcaagctcattt
gataaaactctgaaagtatgggatacaaatactttacaaactgcagatgtatttaatttt
gaagaaacagtttatagtcatcatatgtctccagttgccaccaagcactgtttggtagca
gttggtactagagggcccaaagtacaactttgtgacttaaagtctggatcctgttcccac
attctacagggtcacagacaagaaatattggcagtttcctggtcaccgcgttatgagtat
atcttggcaactgcaagtgctgacagtaaagcaaaattatgggatgtgaggagagcatca
ggatgtttgattactcttgatcagcataatgggaaaaagtcacaagcagttgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcacctc
ctcactgttggtacagataatcgaatgaggctctggaatagttccaatggagaaaacaca
ctagtgaactatggaaaagtatgtaatgacagtagaaaaggattgaaattcactgtctcc
tgtggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctgtttataca
atttactcaggagaacagataactatgcttaagggacattataaaagtgttgactgctgt
gtatttcagtctaatttccaggaactttatagtggtagcagagactgcaatattcttgct
tggataccatccttatatgaatcagttcctgatgatgaggagacttcaaccagatcacag
ttaaatccagcatttgaagatgcctggagcagcagtgatgaggaaggatga
DBGET
integrated database retrieval system
