Balaenoptera acutorostrata scammoni (minke whale): 103000952
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Entry
103000952 CDS
T03086
Symbol
COL6A5
Name
(RefSeq) collagen type VI alpha 5 chain
KO
K06238
collagen type VI alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04151
PI3K-Akt signaling pathway
bacu04510
Focal adhesion
bacu04512
ECM-receptor interaction
bacu04820
Cytoskeleton in muscle cells
bacu04974
Protein digestion and absorption
bacu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103000952 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103000952 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103000952 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103000952 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103000952 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103000952 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bacu04147
]
103000952 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
103000952 (COL6A5)
Exosome [BR:
bacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103000952 (COL6A5)
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103000952 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
103000952 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
vWA_SIBA-E
VWA_CoxE
Copine
Leptin
Motif
Other DBs
NCBI-GeneID:
103000952
NCBI-ProteinID:
XP_007167046
UniProt:
A0A383YW70
LinkDB
All DBs
Position
Un
AA seq
2521 aa
AA seq
DB search
MKILLIVFVLILWTETLTYQSPGPGPEYADVVFLVDSSNHLGIKSFPFVKMFINKMISSL
PIEDHKYRVGLAQYSDGLHREFQLNTFKSSGPMLNHLKKNVRFLGGSLRIGNALREVHTT
YFSNGRDRRQFPPILVVLASAESEDAMEAASKALRSDGVRIISVGMQGTPEETLKAMATG
QFHYSLQTVRDLSMFSQNMTQILKDAAQYKEVAAHSHTVVPFPRACQKDSLADLMFLVDE
SVGTKQNLRNLQNFLKNITFSMDVKDNCLRLGLMSYSDRVQTFSLLSSSTTQSEFQKQIQ
KLSLQAGKSNAGAAIEKMRREGFSASSGSRRAQGVPQIAVLVTDRPSDDKVREAALNLRL
EDVTVFAMGIQGANKTQLEEIVSYPPGQTISMMKSYADLEIYSKNFLKKLQNEIWSQIST
HAEQMELDKTGCVDTKEADLYFLIDGSSSIQNKHFEQIKEFMLAVIEMFSIGPDKVRVGA
VQYSHEKEVEFDINDYTNDVALRKAVSNIKQLGGNTLTGAALDFILPLIRKGRKQRMNEV
PCYLIVLTDGMSMDGVLEPAERLRAEHITIHVVGIGEANRTQLQQIAGAEERVNFGQNFD
SLKSIKNEVVRSICTEKGCEYMKVDIMFLVDGSSSIGSENFGKMKTFMKNLLAKVRIGPD
KTRIGVIQFSDYNREEFQLDKYYTQKEISDAIDRMSPINKNTLTGSALTFVDPYFTEPKG
GRSMVKKFLILITDGEAQDDVIDPAKALRDKGVVIFSVGVYGANRTQLEEISGDGSLVFQ
VESFDDLKAIESKLIFRVCALHDCKSIRQLDVVFVLDHSGSILPQDQESMINVTIHLVKK
SDVGPDRVQFGALRYSDHPEVLFYLNTYSNRSAIIEHLRRPRGTGGNTFTARALKHANNL
FMEEHGSRLKQNVKQMLIIITDGVSHDRNQLSDVASKLRAKGIIIYAVGVGKAEQEELET
MAGNKNYTIHVSNFNKLKDIYLPLQDSMCTNAQEVCNIQEADVIFFCDGSDMVSDSDFVT
MTTFLSDLIDNFDIQSQRMKIGIAQFGSRYQEIIELQNSLTKTQWKSRIQTITKSNGLPR
MDLALKQVSVMFEQSAGGRRKAGVPQTLVVITSGGPRYDVAEAVKTLREDGICILALGIG
DVYKEQLLSITGNSEKIITFKDFDKLKNVDVKKRMVREICQSCGKTNCFLDIVVSFDIST
HLLGQPLFHGHPQLESYLPGILEDIASLRGVSCGAGAEVQVSVAFKVNSDQNFPAKFQIY
QETIFDSLLQVTVNGPTHLNAQFLQSMWDTFKDTSASRGQVLLIFSDGLGGESKIMLEDK
SDRLREAGLDALLVVSLNSTSHDEFSSFEFGKGFDYRTHLTIGMRELGNMLSQYLGNIAE
RTCCCTFCKCSRTPGPQGIQGPQTLKGFPGLKGSRGHSGEEGDPGRQGDTGPQGNRGIAG
CPGERGRKGAKGSAGYKGEHGDDGIDGLDGEEGFHGLPGKKGEKGDPGSQGSPGSRGPPG
GYGEKGFPGDTGNPGQSNNIKGQKGSKGKQGRQGRTGPKGTQGSPSSRGSRGREGQRGVQ
GASGEPGNPGLKGASGAEGLQGSRGSNGLPGRKGEKGNEGHKGPQGAPGPVGDKGSVGRP
GLLGKKGEPGIPGDPGPLGQAGRRGKQGDYGIPGYGPMGRKGVKGPRGFLGDMGQKGVVG
DPGIPGGPGPKGFRGQTLTVGLKGEEGSQGPQGPPGRRGPKGMAGQRVYSQCDLIQFMQD
HSPCWKEKCPVYPTELVFALDQSYDITEQRFNETRDIIISIVNDLHIRENNCPVGARVVV
VSFDSGTSYLIRGSDYHSKKQLLQLLSQIKYQNSGEVRDIGNTMKFVARNIFKRTLGGAN
VQRVAVFFSNGQSASRSSIITATMEFSAMDISPAVFASYERVSLDEAFGFDNTGTFQVLP
FPPNGEYEPLERLRHCTLCYDKCFPNTCKKEIFLPENSYMDVAFLLDNSRNITSDEFKDV
KALVSSMLDNFDIASDPVTSDSGDRIALLSYSPWDGRKKDVVKTEFEFTTYDNQALMKRH
IQTYLQQLNGESTIGHALLWTVEDLFPRTPKLRKHRVIFVVSAGENHERKEFLKKMALKA
KCQGYVIFVISLGSTHKEDIEELASHPPDHHLIQLGRIHKPNLDYVVKFLKPFVYSVRRG
FNQYPPLMLENICRLINSKEEDNRNNGYKFTPEPHEISSGEKSFIGQELSVGRDSSFVLE
DSGSDHLVYIPSQMFMPQKLTTKYDKDQDSEEIASLTSGQENSGRKEEPGPTYELRDASL
QEYYMDVAFLIDASQRIGNDEFKEVKAFITSVLDYFHLAPDPLTSTLGDRVAVLTYSPPG
YMPNTEECPIYLEFDLVTYNSIHQMKHHLQDSLQQLNGDVFIGHALQWTIDNVFVGIPNL
RKNKVIFVISAGETNPLDRGVLRNVSLRAKCQGYSIFVFSFGPLHNDKELEELASHPLDH
HLVQLGRTHKPDLNYIVKYVKPFVHSIRRAINKYPPADMRPKCVNITSPNPENGGTENTV
L
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctgctaattgtatttgttctcatcctttggactgaaacactgacatatcag
agcccagggccaggccctgagtatgccgacgtggtgtttctggtggatagctccaaccac
ctgggaattaaatccttcccatttgtgaagatgttcatcaacaagatgatcagcagcctc
cccatagaggaccacaagtaccgtgtgggcctggcccaatatagcgatgggctccacaga
gaattccaactcaacaccttcaagagcagcggccccatgttgaaccacctcaagaagaac
gtcaggttcttgggcggttccctgcggattgggaatgctctccgggaggtgcacacgacc
tacttctcaaacgggagggacaggaggcagtttcctccgatcctggtggtcttggcttca
gccgagtccgaggatgccatggaagcggcctccaaggcgctgcgcagcgacggggtgagg
atcatctcagtggggatgcaggggacgcctgaggagactctgaaggccatggctacaggc
cagttccactacagcctccagacggtccgagacctcagcatgttctcccaaaacatgacg
cagattctcaaggatgcggctcagtacaaggaggtagcagcccactctcatacagtagtc
cctttccccagggcctgtcagaaagattcacttgccgacctcatgtttctggtggatgag
tctgttgggaccaaacagaatctaaggaacctgcagaacttcctgaagaatatcaccttc
tccatggatgtgaaagacaactgcctgcggcttggtcttatgagttacagtgacagagtt
cagactttttctcttctgagctcaagcacaacccaatccgaatttcagaagcaaatccag
aagctttctctgcaggctgggaaatccaatgctggtgctgccattgagaagatgaggaga
gaaggcttctcagcatcaagtggcagcagaagggcacagggagtgccccagattgcagtc
ctggtcactgacagaccatcagatgacaaggtgcgtgaggctgcactgaatctccggctg
gaggatgtaactgtgtttgctatgggcatccaaggggccaacaagacccagttagaagaa
atagtgtcttaccctccgggacagaccatctccatgatgaagtcctatgcagacttggaa
atttacagtaagaacttcttgaaaaagctccagaatgaaatatggtcccaaatttcaact
catgctgaacaaatggaacttgataaaactggctgtgtagatacaaaagaggctgatctc
tatttcctcattgatggctcaagcagcattcagaataaacactttgagcaaatcaaggaa
tttatgttggcggtgatagagatgtttagcatcggcccagacaaagtccgagttggagct
gtgcagtattcccacgagaaggaagtggaatttgatatcaatgactatactaatgatgtg
gcattgagaaaggctgtttctaacatcaagcaacttggaggcaacactcttactggggca
gccctggatttcattctgccactaataaggaagggaaggaagcagaggatgaacgaggta
ccctgttacctcattgtgttgactgatgggatgtccatggatggtgtcctggaacctgct
gagagactaagggctgaacacatcaccatccacgtggtcggcattggtgaggctaacaga
acacaactgcaacaaattgctggggcagaggaaagggttaactttggacagaactttgat
tctttaaaaagcatcaaaaatgaagttgttcgcagcatctgcactgagaaaggatgtgaa
tacatgaaggtcgatatcatgtttctggtggatggttctagcagtataggatccgaaaat
tttgggaaaatgaaaaccttcatgaaaaacctgttagctaaggttcggattggcccagac
aaaacccgaattggtgtcattcaattcagtgattataatagggaagaattccagcttgat
aaatactatacacaaaaagaaatttctgatgcaatagacagaatgtctcccatcaacaaa
aacactttgactggaagtgcactaacctttgtggatccatacttcactgagcccaagggg
ggccgttcaatggtcaaaaagtttctcatcctcatcactgatggagaagcccaagatgat
gtgatagaccctgcaaaagctcttcgggacaaaggtgtggtcatcttctctgtcggggtg
tacggggccaatagaactcagctggaggagatcagtggggacggcagcctggtcttccaa
gttgagagcttcgatgatctaaaggcaatagagagtaaactcatcttccgtgtgtgtgct
cttcatgattgtaaaagtattagacagttagacgttgtgtttgtgctggaccattcaggc
agcatcctgccccaagaccaagaaagcatgatcaacgtcactatccatttggtgaagaaa
tcggatgttggcccggacagagttcagtttggagcgctcagatactcggatcatcctgag
gttctcttctacctcaatacgtactcaaacagatcagccatcattgagcatctgaggagg
cccaggggcacgggagggaataccttcactgccagggctctgaagcatgcaaacaacctg
ttcatggaggaacatggcagccgtctcaagcaaaacgtgaagcagatgctgatcatcatc
acagatggggtatcccatgaccgaaatcagctcagtgacgtggcttcgaaattaagagcc
aaaggcatcatcatctatgcagtgggtgtaggaaaggccgaacaagaagaactggagact
atggcggggaataaaaactatactatccacgtcagtaatttcaacaaactgaaagatatt
tacctgcctctgcaagatagtatgtgtaccaatgcacaagaggtctgtaacattcaagaa
gccgatgtgattttcttttgtgatggctctgacatggtatctgattcagactttgttacc
atgacaactttcttgtcagacttaattgataattttgacattcagtctcaaaggatgaaa
attgggatagcacaatttgggagtcgttaccaagaaattattgagttgcaaaactctctg
actaaaacccagtggaagtctcgaattcaaactatcacgaagagcaacgggcttccgcga
atggacttggccctgaaacaagtgagcgttatgtttgagcaatccgctggtgggagaagg
aaggctggtgtccctcagactttggtggttatcacatctgggggtccccgctatgatgtg
gcagaagcagtgaagaccctgagagaagatggcatttgcattctggctttgggcatagga
gatgtttataaggaacagcttctgtcaataacgggcaattctgaaaaaatcatcactttt
aaagactttgataaactaaagaatgtggatgtgaaaaaaagaatggtccgtgaaatctgc
cagagttgcgggaaaaccaactgctttctggacatagtggtcagcttcgacatttccact
cacctgctggggcagccattgttccatggccacccccagctggaatcatacctcccaggc
atcttagaggacattgcctccctcaggggtgtgagctgcggggcaggcgcagaggtacaa
gtgagcgtggcctttaaggtgaacagtgaccagaatttccctgccaagttccaaatctac
caggaaacaatatttgacagcctactgcaagtcaccgtcaacgggccaactcacctgaat
gcacagttcctgcagtccatgtgggacacgtttaaggatacgtctgcatcccgaggacag
gtattactcatcttttcagatggtcttgggggtgaaagcaaaataatgcttgaagataaa
tcggacagactcagagaagcaggacttgatgctttgctggtggtttccctaaactcaacc
tctcatgatgagttttccagctttgaatttggaaaaggatttgattacaggactcacctg
accattggaatgagagaattgggcaatatgttatcacagtatctgggaaacattgcagag
aggacttgctgctgtacgttttgcaagtgttcacggactccaggacctcaagggatccaa
ggaccacaaaccttaaagggttttccaggtctgaaaggcagcagaggacacagcggagag
gaaggagaccctggaagacaaggagacactggaccccaaggaaacagagggattgcagga
tgtccaggggagcggggtcgaaagggagccaaaggatctgctggatataagggagaacat
ggagacgatgggattgatggactcgatggggaagagggctttcatggacttcctgggaaa
aaaggagaaaagggtgatccaggatcccagggcagcccaggttccagaggccctcctggg
ggatatggggagaagggcttcccaggggatactggtaatccaggacaaagcaataacatc
aaaggacaaaagggctccaaaggaaaacaaggaagacaaggtagaaccggcccgaaaggt
acacaaggcagtcctagttccagagggagcaggggaagagaaggccagaggggggtccag
ggtgcctcgggggaaccagggaaccctggacttaaaggtgcatcaggagctgaaggatta
caaggctcacgggggtcaaatggacttcccggcaggaaaggagagaagggaaacgagggg
cacaaaggacctcagggtgctcctgggccagtgggagataaagggagtgttggaaggcct
ggacttttggggaaaaagggagaacctggaattcctggagatccagggccactggggcaa
gctggacggcgaggaaagcaaggtgattatggcattccgggctacggtcctatgggacga
aaaggagtaaagggcccaagaggattccttggagatatgggtcaaaagggtgttgttggt
gatcctggaattcctggggggcctggacccaaaggatttaggggacaaacactcactgta
ggcttgaaaggtgaagaaggctctcaaggaccccaaggccctcctggacggagaggccct
aaaggcatggcagggcagcgggtatattctcaatgtgatctaatccaattcatgcaggac
catagtccttgttggaaagaaaagtgtccagtgtatccaacagagctagtatttgccctg
gaccagtcctacgatatcacagagcagagatttaatgaaacgagggacatcatcatttct
attgtcaatgaccttcacatcagggaaaataattgccctgtgggagcaagagttgtcgtg
gtttccttcgactcaggcaccagctacctcatccgtggatctgactaccatagcaagaag
caactccttcagcttctttcccaaattaaatatcaaaactctggggaagtccgagatatt
ggtaacacgatgaagtttgtggctcggaacatcttcaagcggacgttaggaggagccaat
gtgcagagagtcgctgtgttttttagcaatggacaatctgccagtaggtcatccatcatc
acggccaccatggagtttagcgccatggacatcagccctgcagtctttgcttcttatgaa
agggtttcccttgacgaggcttttgggtttgacaacacgggaacatttcaggtgcttcct
tttcctccaaatggggaatatgaaccattagaaagacttcggcactgtactctttgctat
gataaatgttttccaaatacttgcaagaaagagattttcttacctgaaaattcatacatg
gatgtcgccttcctcttagacaattctaggaatataacaagtgatgaatttaaggatgtc
aaagccttggtgagctcaatgcttgacaactttgatattgcctcagaccctgtaacctca
gactctggtgataggattgccttgttgagctactctccttgggatgggaggaagaaggat
gtggtaaaaacagagtttgagtttacaacttatgacaatcaagctctaatgaagaggcac
atccagacttacctccaacaactaaatggagaatccaccattggccatgccctactgtgg
actgtggaagatctcttcccaagaacacccaaactgagaaaacatagggtcatctttgtg
gtctccgctggagaaaatcatgagagaaaggaattcttaaagaagatggctctgaaggcc
aagtgtcaaggctatgtcatatttgtgatttctctgggctctacacataaggaggacata
gaggagctagccagccacccacctgatcatcatctgatacagcttgggagaattcataaa
ccaaacctggattatgttgtgaagtttttaaagccatttgtgtactcagttagacgagga
ttcaatcagtacccaccactgatgcttgaaaacatctgcagactcatcaattcaaaggaa
gaggataatcgaaataatggctataaatttacccctgagccacatgagatttcttcagga
gagaagagcttcattggccaggaattgagtgtgggcagagattcatcttttgtgttggaa
gacagtggaagtgaccatctggtttacattccaagccaaatgtttatgccacagaaatta
acaactaaatatgacaaagatcaggattctgaagaaattgcaagtctcacttctggacag
gaaaacagtggcagaaaagaagaaccaggtcctacttatgaacttagagatgcctctctt
caagaatattacatggatgtggcttttctcatagatgcttcccaaagaataggaaatgat
gagtttaaggaagtgaaagcttttataacctcagtgcttgattactttcacctggcccca
gatccactgacctccaccttgggagacagagtggcagtcctgacctactctcctccaggc
tatatgcccaacacagaagaatgccccatctacctagaatttgatttggttacttataac
agtatacatcaaatgaaacatcatctccaagactcccttcagcagcttaatggagatgtt
tttattggccatgccttacagtggacaattgacaatgtctttgtaggaatccccaacctg
aggaaaaacaaagttatctttgttatatctgctggtgaaaccaatcctttagacagggga
gtcttaagaaatgtatctctgagagccaagtgtcagggctactccatatttgtgttttcc
tttggtcctctacacaatgacaaggaattagaagaattagccagccacccactggatcat
cacttagtccagcttggccgaacccacaagccagatttgaactatatcgtcaaatatgtc
aagccatttgttcattcaatcagacgtgccatcaacaaatatccccctgcagatatgaga
cccaaatgtgttaacatcacctctcccaacccagagaatggtggcacagaaaacactgta
ttgtga
DBGET
integrated database retrieval system
