Balaenoptera acutorostrata scammoni (minke whale): 103001007
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Entry
103001007 CDS
T03086
Symbol
UTP4, CIRH1A
Name
(RefSeq) UTP4, small subunit processome component
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103001007 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bacu03009
]
103001007 (UTP4)
Ribosome biogenesis [BR:
bacu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103001007 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WDR55
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_BBS7
PROPPIN
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
PQQ_2
Frtz
DUF1513
Tor_FN3_1st
Motif
Other DBs
NCBI-GeneID:
103001007
NCBI-ProteinID:
XP_007198248
UniProt:
A0A384BFP0
LinkDB
All DBs
Position
Un
AA seq
705 aa
AA seq
DB search
MWGRGGERRAPRVASPSAGMGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVE
IYNLSANYFQEKFFPGHESRATEALCWANGQRLFSAGLNGEIIEYDLQALNIKYAMDAFG
GPIWSMAASPSGSQLLVGCEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHIA
AGSIDYISVFDVKSGSAIHKMLVDRQYMGVSKRKCIVWGVAFLSDGTVISADSAGKVQFW
DSATGTLVKNHLIADADVQSIAVSDQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTK
PFQHHTHDVRAVAHSPIALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLVSCA
KKKQLLLFQFAHHLELWRLGSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPC
GSWIAYSTASRFFLYRLNYEHDNINLQRVSKMPAFLRSALQILFSEDSAKLFVASNQGSL
HVIRLLEGSFKHLHTFQPQSGTVESMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCT
VPAYNFPVTALAIAPNTNNLVIAHSDQQVFEYSIPDKQYTQWSRTIQKQGFHHLWLQRDT
PITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPLPPTNESDIIRRRTAHAF
KISKKYKPLLFMDLLDERTLVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtggggccggggcggagagaggcgagcgccgagagtggctagcccatccgctggaatg
ggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcagggatccgctgt
gtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtggaa
atttataatttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtctcgg
gctacggaagctctgtgctgggcaaacggacagcgactgtttagtgctggacttaatgga
gagattattgagtatgatttgcaggcgttaaacatcaagtatgctatggatgcctttgga
ggacccatttggagcatggctgccagccccagtggctctcaacttttggttggctgcgaa
gatggatctgtgaaactatttcagatcaccccagacaaaatccagtttgaaagaaatttt
gatcgtcagaaaagtcgaatcctgagcctcagctggcatcccgctggtacccacattgca
gctggctccatagactacattagtgtgtttgatgtcaaatcagggagcgctattcataag
atgcttgtggataggcagtacatgggtgtgtctaagcggaagtgtatcgtatggggcgtg
gccttcctgtccgatggcaccgtcataagcgcggactctgccgggaaggtgcagttctgg
gactcagctaccgggacgcttgtgaagaatcatctcatcgcagatgctgacgtgcagtcc
attgccgtatctgatcaagaagacagtttcgtggtgggcacagccgaggggacagtgttc
cattttcagctggtctctgtgacttccaacagcagtgagaagcagtgggtgcggacaaag
ccatttcagcatcacactcacgacgtgcgagccgtggcccacagccccatagcactgata
tctggaggcacagacacccacttagtcattcgtcctctcatggagaaggtggaggtaaag
aattatgatgctgctctccgaaaaatcacttttccccatcgacgtctcgtttcctgtgca
aaaaagaagcagcttctcctcttccagtttgctcatcacttggaactttggcgactggga
tccacagttgcaacaggaaagaatggggatacccttccactctctaaaaatgcagatcac
ttacttcacctcaagacaaagggtcctgagaacattatctgcagctgtatctccccatgt
ggaagttggatagcctattctacagcttctcggttttttctctatcgtttgaattatgaa
catgacaacataaacctccaaagggtttccaaaatgccagcgttccttcgctctgccctt
cagattttgttttctgaggactcagcgaagctctttgtggcatcaaatcaagggtctctg
catgtcattcggctgctggagggaagcttcaagcacctgcatacttttcagcctcagtca
gggacagtggagtccatgtgtcttttggcagtcagtccagatggaaattggctagctgca
tcaggtaccagtgctggagtccatgtgtacaacgtgaaacaactaaagcttcactgcaca
gtgcctgcttacaatttccctgtgactgctctggccatcgcccccaataccaacaacctt
gtcattgctcattctgaccagcaggtatttgagtacagcattccagacaaacagtataca
caatggagccggaccatccagaagcaggggtttcatcatctttggctccaaagggatact
cccatcacacatatcagttttcatcccaagagaccaatgcacatccttctccatgatgcg
tacatgttctgcatcatcgacaagtcgttgcctcttccaaatgacaaaaccttactctac
aatccactgcctcccacaaatgaatcagatatcatcaggaggcgcacagctcatgccttt
aaaatttctaagaaatataagcctctactcttcatggatcttttggatgaaagaacacta
gtggcagtagaacggcctctggatgacatcattgctcagctgccaccacccatcaaaaag
aagaaatttgggacctaa
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