KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103001645
Entry
103001645         CDS       T03086                                 
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103001645 (POLR1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bacu03021]
    103001645 (POLR1A)
Enzymes [BR:bacu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103001645 (POLR1A)
Transcription machinery [BR:bacu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     103001645 (POLR1A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1 DUF6179 DUF7736 RNA_pol_3_Rpc31
Other DBs
NCBI-GeneID: 103001645
NCBI-ProteinID: XP_007175394
UniProt: A0A383ZKK4
LinkDB
Position
Un
AA seq 1717 aa
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFEKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERVLYRFLEENADPTAFEIQEELERYTTKILQNNLLGSHGAH
VKNVCESRSKLIAFFWKSHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPQAPGIEDAQVGKRGYLTPTSAQEHLTALWKNEGFFLNYLFLGLEDVGMESRFNPSMFF
LDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAP
AADEEKDPSIAMDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIR
QILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQAVINGPSVHPGASMVINEDGSRTALSASNLTQREAVAKQLLTPAMGAPKPQGTKIV
CRHVKNGDVLLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHF
PQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVY
RGLTDRVGRVRLFPPAILKPCPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKIGGKAWVK
ESPRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKIL
TCLARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTHCGPRAVRAALNLPEAAS
CDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTG
IKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL
YGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFKAIKKWQSK
HSNTLLRKGAFLNYSQKIQAAVKALNLEGANQNGRSPETHQMLRMWAELDEQSRRKYQKK
AAPCPDPSLSVWRPDIYLASVSETFEKKVDGYSCEWAAQAEKSYEKSELSLDRLRTLLQL
KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAS
IKTPMMSVPVFSTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFSMGERQNKFRVYQLR
FQFLPHAYYQQEKCLRPEDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLD
NAGELERSRGEQDGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEEKDK
DDDDLQEEGTVLGEGVPQAPAQEEEGGSGPEEDSLPAAPLTQPWKPARSREPQGAKAVER
RVRAVRECHPFIEDYQYDTQGGLWCQVMVKLPLIKVNFDMSSLVVSLAQDAVVYATKGIT
RCLLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYXXXXXXXNRFGIRSNSSPLQQMTFETSFQFLKQ
ATMMGSRDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq 5154 nt   +upstreamnt  +downstreamnt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagctcaagaaattaagcgttaagtccattacaaaccctcggtacctagat
agcctggggaacccgtcggtgaacggcctgtacgatctggctctgggccccgcagactcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctccgggcacctgggacac
atcgagctcccgctcactgtgtacaaccctctcctcttcgagaaactctacctgctgctc
cggggttcctgtttaaactgtcacatgctgacttgcccccgggctgtgattcacctgctg
ctctgccagctgagagttctggaagtcggggccctacaagcagtgtacgagctggagaga
gttctgtacaggtttctggaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacaaccaaaatcctacagaacaacctcctgggatcccacggcgcacat
gtaaaaaatgtctgtgagagcaggagcaagctcatcgctttcttctggaagtcacacatg
actgctaagcgatgtccccactgcaaaactgggcggtcagttgtccgaaaggagcacaac
agcaaactgacaatcacatatccggccatggtgcacaggaaagctgaccagaaggacact
gagccccaggctccaggaattgaggacgctcaggtgggaaaacgaggatacttgacaccc
accagcgctcaagaacatctcacggctctttggaagaatgaaggattctttctgaattac
ctttttctgggactggaagatgttggcatggagtcgagattcaatcccagtatgttcttt
ctggatttcttggtggtgccaccctcaaggtaccgccccgtcagccgcctcggggaccag
atgtttaccaacggccagacggtgaacctgcaggctgtcatgaaggatgtggttctgatc
cgaaagcttctggcgttgatggcccaagaacaggagctgccaagtgaggtggcagcacct
gccgcagatgaggaaaaagacccttcgatcgctatggaccggtcctttttgagtctactt
ccaggccagtccctcacagacaaactttacaacatttggattcgccttcagagccacgtc
aatattgtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagg
cagatcctggagaagaaggatggtttattccggaagcacatgatgggaaagcgagtagac
tacgcagcccgctcagtcatctgtccggacatgtacatcaacaccaatgaaatcggaatt
cccatggtgtttgccacaaagctgacctaccctcagccagtcaccccctggaacgttcag
gaactgaggcaggcggtcatcaacggccccagtgtgcacccaggagcctccatggtcatc
aacgaggatggcagccgcacggccctgagcgcctcgaacctaacccagcgggaagccgtg
gccaaacagctcctgacaccagccatgggggcacctaagccccaggggacaaagattgta
tgccggcacgtgaagaatggggacgttctcctcctgaaccggcagcccaccctgcacagg
ccctccatccaggcgcatcgcgcccgcatcctgcccgaggagaaggtcctgcggctccac
tatgccaactgcaaggcctacaacgccgactttgatggagacgagatgaacgcccacttc
cctcagagtgaactgggccgggccgaggcctacgtcctggcctgcacggatcagcagtac
cttgttcccaaggatggccagccgttggcagggctgatccaagatcacatggtttcgggt
gcaaacatgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtac
cgaggactcaccgacagagtggggcgcgtgaggctctttcctcctgccatcctgaagccc
tgtccgctgtggacaggaaagcaggttgtgtccacgctgctcatcaacataatcccagag
gatcacgtcccactgaacttgtcagggaaggcgaagattggcgggaaggcctgggtgaag
gagtctccgcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatc
atcagggaaggggagctgctctgcggggtgctggacaaggcgcattacgggagctccgcc
tacggcctggtccactgctgctacgagatctacggcggggagaccagcggcaagattctc
acctgcctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggc
gtggaagacattttggtcaagccgaaggcagatgtcaggagacacaggatcattgaagag
tccacccactgtgggccccgggctgtcagggctgcgttaaaccttccagaagcggcatcg
tgtgatgaggtccgagggaagtggcaggatgcccatctgggcaaagaccagagggatttt
aacatgattgatctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaag
gcatgcatgcctttcggcctgcacagacagttcccagagaacaacttgcagatgatggta
cagtctggagccaaaggttcaactgtgaataccatgcagatctcgtgcctgctgggccag
atcgaactggaaggtcggaggcccccgctgatggcatctggcaagtcactgccctgcttc
gagccttatgagttcacccccagggctggcggcttcgtcactggcagattcctcaccggc
atcaagcctcctgagttcttcttccactgcatggccgggcgagagggtctggtggacacc
gctgtgaagaccagccgctccggctacctccaaaggtgcatcatcaagcacctggagggg
ctggtcgtccagtacgacctgacggtccgcgacagcgacggcagcgtggtgcagttcctg
tacggggaggacggcctggacatccccaagacacagttcctgcagcccaagcagttcccc
ttcctcgccagcaactatgaggtgataatgaaatcgaagcacctccatgaagttttatcc
agagcagatccccagaaagctctccgccacttcaaagccatcaaaaaatggcaaagcaag
cattccaacaccctgctgagaaaaggcgccttcttgaattattcccagaaaattcaagca
gctgtgaaagccttgaacctcgagggcgcaaaccagaatggccgcagccctgagactcac
cagatgttgaggatgtgggctgagttagacgagcaaagccggaggaaataccagaagaag
gcggctccttgtcctgaccccagtctgtctgtctggcgcccagacatctaccttgcatca
gtgtcagaaacgtttgaaaagaaggtggatggctacagttgcgagtgggcagctcaagca
gagaagagttacgagaaatcggagctctctctggacaggctgaggactcttctgcagctg
aagtggcagcgctcgctgtgtgacccgggagaggccgtgggcctgctggccgcacagagc
atcggggagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgag
atgaatgtcaccctgggcattcccaggctgagggagattctcatggtggccagcgccagc
atcaagacgcccatgatgagcgtgcctgtattcagcaccaagaaagcgctgaagaaggtg
aaaagcctgaagaagcagctcaccagggtgtgcctcggggaggtgttggagaaaattgat
gtccaggagtccttctctatgggggagagacagaacaagttccgggtgtaccagctgcgg
tttcagttcctgccacacgcgtactaccagcaggaaaagtgcctgagacccgaggacatc
ctgcatttcatggaaacaagattctttaaaattctgatggaatccatcagaaagaagaat
agtaaagcgtcagctttcagaagcgtaaacacgcggagagctacccagcgggatctagac
aacgcaggcgagttggagaggagtcggggagagcaggacggcgatgaggaagaggagggg
cacattgtggacgccgaagctgaggagggagacgctgacgcctcggacgccaaacgcaag
gagaaacaagaggaggaggtcgattacgagagtgaggaggaggaggaggagaaggacaag
gacgacgacgacctgcaggaggaagggaccgtcctcggggaaggcgttccccaggccccg
gcgcaggaggaggaggggggctcaggccccgaggaggactcgctccccgccgcccccctg
acgcagccgtggaagcccgcccgcagccgggagccccagggcgccaaggcggtggagcgc
cgggtgcgggcggtgcgcgagtgccacccgttcatagaggactaccagtacgacacccag
ggcggcctgtggtgccaggtgatggtgaaactccctctcatcaaggtcaactttgacatg
agctccctggtagtgtccctggcccaagacgccgtcgtctacgcgaccaagggcatcacg
aggtgcctcctgaacgaaaccaccaacagtaagaacgagaaggagctcgtcttaaacaca
gaaggcatcaacctcccggagctgttcaagtacgccgaggtcctggatttgcgccgcctc
tattccaatgacatccatgccatggccagcacgtacggcatcgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtgttcgccgtgtacggcatcgccgtcgacccccgccat
ctctccctggtcgctgactacnnnnnnnnnnnnnnnnnnnnnaaccgctttgggatccgg
tcgaactcctccccgctgcagcagatgacgtttgagaccagcttccagtttctgaagcag
gccaccatgatgggatcccgcgatgagctgaggtccccgtcagcctgcctcgtggtcggg
aaggtcgtcaagggcgggacaggcctcttcgagctcaagcagcccctgagatag

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