Balaenoptera acutorostrata scammoni (minke whale): 103001645
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Entry
103001645 CDS
T03086
Symbol
POLR1A
Name
(RefSeq) RNA polymerase I subunit A
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103001645 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103001645 (POLR1A)
Enzymes [BR:
bacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103001645 (POLR1A)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103001645 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
DUF6179
DUF7736
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
103001645
NCBI-ProteinID:
XP_007175394
UniProt:
A0A383ZKK4
LinkDB
All DBs
Position
Un
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFEKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERVLYRFLEENADPTAFEIQEELERYTTKILQNNLLGSHGAH
VKNVCESRSKLIAFFWKSHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKADQKDT
EPQAPGIEDAQVGKRGYLTPTSAQEHLTALWKNEGFFLNYLFLGLEDVGMESRFNPSMFF
LDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAP
AADEEKDPSIAMDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIR
QILEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQAVINGPSVHPGASMVINEDGSRTALSASNLTQREAVAKQLLTPAMGAPKPQGTKIV
CRHVKNGDVLLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHF
PQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVY
RGLTDRVGRVRLFPPAILKPCPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKIGGKAWVK
ESPRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKIL
TCLARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTHCGPRAVRAALNLPEAAS
CDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTG
IKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL
YGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFKAIKKWQSK
HSNTLLRKGAFLNYSQKIQAAVKALNLEGANQNGRSPETHQMLRMWAELDEQSRRKYQKK
AAPCPDPSLSVWRPDIYLASVSETFEKKVDGYSCEWAAQAEKSYEKSELSLDRLRTLLQL
KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAS
IKTPMMSVPVFSTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFSMGERQNKFRVYQLR
FQFLPHAYYQQEKCLRPEDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRATQRDLD
NAGELERSRGEQDGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEEKDK
DDDDLQEEGTVLGEGVPQAPAQEEEGGSGPEEDSLPAAPLTQPWKPARSREPQGAKAVER
RVRAVRECHPFIEDYQYDTQGGLWCQVMVKLPLIKVNFDMSSLVVSLAQDAVVYATKGIT
RCLLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYXXXXXXXNRFGIRSNSSPLQQMTFETSFQFLKQ
ATMMGSRDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagctcaagaaattaagcgttaagtccattacaaaccctcggtacctagat
agcctggggaacccgtcggtgaacggcctgtacgatctggctctgggccccgcagactcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgctccgggcacctgggacac
atcgagctcccgctcactgtgtacaaccctctcctcttcgagaaactctacctgctgctc
cggggttcctgtttaaactgtcacatgctgacttgcccccgggctgtgattcacctgctg
ctctgccagctgagagttctggaagtcggggccctacaagcagtgtacgagctggagaga
gttctgtacaggtttctggaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacaaccaaaatcctacagaacaacctcctgggatcccacggcgcacat
gtaaaaaatgtctgtgagagcaggagcaagctcatcgctttcttctggaagtcacacatg
actgctaagcgatgtccccactgcaaaactgggcggtcagttgtccgaaaggagcacaac
agcaaactgacaatcacatatccggccatggtgcacaggaaagctgaccagaaggacact
gagccccaggctccaggaattgaggacgctcaggtgggaaaacgaggatacttgacaccc
accagcgctcaagaacatctcacggctctttggaagaatgaaggattctttctgaattac
ctttttctgggactggaagatgttggcatggagtcgagattcaatcccagtatgttcttt
ctggatttcttggtggtgccaccctcaaggtaccgccccgtcagccgcctcggggaccag
atgtttaccaacggccagacggtgaacctgcaggctgtcatgaaggatgtggttctgatc
cgaaagcttctggcgttgatggcccaagaacaggagctgccaagtgaggtggcagcacct
gccgcagatgaggaaaaagacccttcgatcgctatggaccggtcctttttgagtctactt
ccaggccagtccctcacagacaaactttacaacatttggattcgccttcagagccacgtc
aatattgtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagg
cagatcctggagaagaaggatggtttattccggaagcacatgatgggaaagcgagtagac
tacgcagcccgctcagtcatctgtccggacatgtacatcaacaccaatgaaatcggaatt
cccatggtgtttgccacaaagctgacctaccctcagccagtcaccccctggaacgttcag
gaactgaggcaggcggtcatcaacggccccagtgtgcacccaggagcctccatggtcatc
aacgaggatggcagccgcacggccctgagcgcctcgaacctaacccagcgggaagccgtg
gccaaacagctcctgacaccagccatgggggcacctaagccccaggggacaaagattgta
tgccggcacgtgaagaatggggacgttctcctcctgaaccggcagcccaccctgcacagg
ccctccatccaggcgcatcgcgcccgcatcctgcccgaggagaaggtcctgcggctccac
tatgccaactgcaaggcctacaacgccgactttgatggagacgagatgaacgcccacttc
cctcagagtgaactgggccgggccgaggcctacgtcctggcctgcacggatcagcagtac
cttgttcccaaggatggccagccgttggcagggctgatccaagatcacatggtttcgggt
gcaaacatgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtac
cgaggactcaccgacagagtggggcgcgtgaggctctttcctcctgccatcctgaagccc
tgtccgctgtggacaggaaagcaggttgtgtccacgctgctcatcaacataatcccagag
gatcacgtcccactgaacttgtcagggaaggcgaagattggcgggaaggcctgggtgaag
gagtctccgcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatc
atcagggaaggggagctgctctgcggggtgctggacaaggcgcattacgggagctccgcc
tacggcctggtccactgctgctacgagatctacggcggggagaccagcggcaagattctc
acctgcctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggc
gtggaagacattttggtcaagccgaaggcagatgtcaggagacacaggatcattgaagag
tccacccactgtgggccccgggctgtcagggctgcgttaaaccttccagaagcggcatcg
tgtgatgaggtccgagggaagtggcaggatgcccatctgggcaaagaccagagggatttt
aacatgattgatctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaag
gcatgcatgcctttcggcctgcacagacagttcccagagaacaacttgcagatgatggta
cagtctggagccaaaggttcaactgtgaataccatgcagatctcgtgcctgctgggccag
atcgaactggaaggtcggaggcccccgctgatggcatctggcaagtcactgccctgcttc
gagccttatgagttcacccccagggctggcggcttcgtcactggcagattcctcaccggc
atcaagcctcctgagttcttcttccactgcatggccgggcgagagggtctggtggacacc
gctgtgaagaccagccgctccggctacctccaaaggtgcatcatcaagcacctggagggg
ctggtcgtccagtacgacctgacggtccgcgacagcgacggcagcgtggtgcagttcctg
tacggggaggacggcctggacatccccaagacacagttcctgcagcccaagcagttcccc
ttcctcgccagcaactatgaggtgataatgaaatcgaagcacctccatgaagttttatcc
agagcagatccccagaaagctctccgccacttcaaagccatcaaaaaatggcaaagcaag
cattccaacaccctgctgagaaaaggcgccttcttgaattattcccagaaaattcaagca
gctgtgaaagccttgaacctcgagggcgcaaaccagaatggccgcagccctgagactcac
cagatgttgaggatgtgggctgagttagacgagcaaagccggaggaaataccagaagaag
gcggctccttgtcctgaccccagtctgtctgtctggcgcccagacatctaccttgcatca
gtgtcagaaacgtttgaaaagaaggtggatggctacagttgcgagtgggcagctcaagca
gagaagagttacgagaaatcggagctctctctggacaggctgaggactcttctgcagctg
aagtggcagcgctcgctgtgtgacccgggagaggccgtgggcctgctggccgcacagagc
atcggggagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgag
atgaatgtcaccctgggcattcccaggctgagggagattctcatggtggccagcgccagc
atcaagacgcccatgatgagcgtgcctgtattcagcaccaagaaagcgctgaagaaggtg
aaaagcctgaagaagcagctcaccagggtgtgcctcggggaggtgttggagaaaattgat
gtccaggagtccttctctatgggggagagacagaacaagttccgggtgtaccagctgcgg
tttcagttcctgccacacgcgtactaccagcaggaaaagtgcctgagacccgaggacatc
ctgcatttcatggaaacaagattctttaaaattctgatggaatccatcagaaagaagaat
agtaaagcgtcagctttcagaagcgtaaacacgcggagagctacccagcgggatctagac
aacgcaggcgagttggagaggagtcggggagagcaggacggcgatgaggaagaggagggg
cacattgtggacgccgaagctgaggagggagacgctgacgcctcggacgccaaacgcaag
gagaaacaagaggaggaggtcgattacgagagtgaggaggaggaggaggagaaggacaag
gacgacgacgacctgcaggaggaagggaccgtcctcggggaaggcgttccccaggccccg
gcgcaggaggaggaggggggctcaggccccgaggaggactcgctccccgccgcccccctg
acgcagccgtggaagcccgcccgcagccgggagccccagggcgccaaggcggtggagcgc
cgggtgcgggcggtgcgcgagtgccacccgttcatagaggactaccagtacgacacccag
ggcggcctgtggtgccaggtgatggtgaaactccctctcatcaaggtcaactttgacatg
agctccctggtagtgtccctggcccaagacgccgtcgtctacgcgaccaagggcatcacg
aggtgcctcctgaacgaaaccaccaacagtaagaacgagaaggagctcgtcttaaacaca
gaaggcatcaacctcccggagctgttcaagtacgccgaggtcctggatttgcgccgcctc
tattccaatgacatccatgccatggccagcacgtacggcatcgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtgttcgccgtgtacggcatcgccgtcgacccccgccat
ctctccctggtcgctgactacnnnnnnnnnnnnnnnnnnnnnaaccgctttgggatccgg
tcgaactcctccccgctgcagcagatgacgtttgagaccagcttccagtttctgaagcag
gccaccatgatgggatcccgcgatgagctgaggtccccgtcagcctgcctcgtggtcggg
aaggtcgtcaagggcgggacaggcctcttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system