Balaenoptera acutorostrata scammoni (minke whale): 103005398
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Entry
103005398 CDS
T03086
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103005398 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103005398 (CNOT6)
Enzymes [BR:
bacu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103005398 (CNOT6)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103005398 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103005398 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
103005398
NCBI-ProteinID:
XP_007169894
UniProt:
A0A383Z4T4
LinkDB
All DBs
Position
Un
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALYLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADVISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPPLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSALGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTKFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatatgagccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggtggagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgtatctaagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctctaataaaatccggagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggatatattgaacctctat
ctggaaccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggattatgttacaagaacca
gacagaacacggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatatggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagttgcaatgctgatgtcataagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtt
gatggctgtgcaatattctttaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcaatggcaaattcagaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgctgtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaagccacctcttggaacagaaaaacaacttattctcgtggctaatgct
catatgcactgggaccctgaatactctgatgtgaagttggttcaaacaatgatgttcctc
tcagaagtgaagaacatcattgataaagcctcgagaagcctccagtccagtgcattggga
gaatttggaactattccactggtgttgtgtgcagatcttaattctttgccggactctggt
gttgtggaatatttgagcactggtggagtagaaacaaatcataaagactttaaggaactg
agatataatgaaagtcttacaaaattcagttgtaatgggaaaaatgggacaaccaatgga
aggatcactcatggtttcaagttgaagagtgcctatgagagtggcctgatgccttacaca
aattacacgtttgattttaagggtataattgactacatcttctattctaaacctcagctg
aacactttaggcatcctgggacctctggaccaccattggctagttgagaacaatatcagc
ggctgcccacacccactcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagttaacggcattcaccttcctggcaggaggtag
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