Balaenoptera acutorostrata scammoni (minke whale): 103006388
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Entry
103006388 CDS
T03086
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03082
ATP-dependent chromatin remodeling
bacu04714
Thermogenesis
bacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103006388 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103006388 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103006388 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103006388 (SMARCD1)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103006388 (SMARCD1)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103006388 (SMARCD1)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103006388 (SMARCD1)
PBAF complex
103006388 (SMARCD1)
GBAF(ncBAF) complex
103006388 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
103006388
NCBI-ProteinID:
XP_007179401
UniProt:
A0A383ZWH3
LinkDB
All DBs
Position
Un
AA seq
476 aa
AA seq
DB search
MGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQS
RKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQ
TIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDS
ALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVN
VRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVIC
DKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDT
LKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQ
CRDLKTMTDVVGNPEEERRAEFYFQPWAQEAMCQYFYSKVQQRRQELEQALGIRNT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccg
agaccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccct
ggctatggggggaacccttcagtccgacctggtctggcccagtcagggatggaccagtcc
cgcaagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcgg
aaccacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaa
ctggtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccag
actatcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaa
cggaagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggat
ggggaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattca
gccttgtccaaatatgatgccaccaaacaaaagaggaagttctcttctttttttaagtcc
ttggtgatcgaactggacaaagacctgtatgggccagataaccatctggtggaatggcac
aggaccgccactacccaggagacagatggcttccaggtgaagcggccaggagacgtgaat
gtacggtgtactgtcctgctgatgctggattaccagcctcctcagtttaaattagaccct
cgtctggctcggctgctgggcatccacacccagacccgtccagtgatcattcaagcactg
tggcaatatattaagacgcataagctccaggacccacatgagcgggagtttgtcatctgt
gacaagtacctccagcagatctttgagtctcaacgtatgaagttttcagagatcccccaa
cggctccacgccttgcttatgccaccagagcccatcatcattaatcatgttatcagtgtt
gacccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggatgatacc
ttgaagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctact
ctagacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgagag
ttcatgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccag
tgccgggacctcaagaccatgactgatgtggtgggtaacccagaggaagagcgccgagct
gagttctacttccagccttgggcacaggaggccatgtgccaatacttctactccaaggtg
cagcagagacgacaagaattagagcaagccctgggaatccgaaatacatag
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