Balaenoptera acutorostrata scammoni (minke whale): 103006514
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Entry
103006514 CDS
T03086
Name
(RefSeq) dmX-like protein 2-like
KO
K24155
rabconnectin-3a
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103006514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103006514
Membrane trafficking [BR:
bacu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103006514
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
103006514
RAVE complex
103006514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
PEP-utilisers_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103006514
NCBI-ProteinID:
XP_007186357
LinkDB
All DBs
Position
Un
AA seq
3042 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVEDVPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV
SCVECSNQHGRVAASYGNAVCIFEPLGINSHKRNCQLKCQWLKTGQFFLSSVTYNLAWDP
QDNRLLTATDSIQLWAPPGGDILEEEEEIDNKIPPVLNDWKCIWQCKTSVSVHLMEWSPD
GEYFATAGKDDCLLKVWYPMTGWKSSIIPLDHHEVERRQASTQFSFVYLAHPRAVTGFSW
RKTSKYMPRGSVCNVLLTSCHDGVCRLWAETVLPEDCLLGEQICETTTSSTASNLTHAGR
HKDRVQHALETIHHLKNLRKGQRKSSILVTHTELMHDQMATHEVQRHISHHANALCHFHI
AASINPTTDIPNVLVGTVFNIDDGNGGFVVHWLNNKEFHFTSSTEIFMQQLRKLSEKQVD
HENDKADREDEERSQEERERGLRMKLDHELSLDRESEAGTGSSEHEDGEREGSPRTCSRP
GVPMPLPTVLLDRXXXXXXKIEMLLTEWNKNPDMLFTIHPVDGTFLVWHVKYLDEYNPGI
FRQVQVSFSSRIPVAFPSGDASSLSKNIMMYACINATKDSHHTLLHEDMMAECSPHGSQL
HSGPHSTNMNILAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLN
DLACHSVLPLLLTSSHHNALLTPESDFQWDSDNKLSRLMDPVRHIKGSSKQPLRNAATRT
FHDPNAIYSELILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTY
CNSASACFVASDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCII
ELNAITNQCGSNTQLLHVFQEDFIRGYKPHKEDMEKKETEIFFQPSQGYRPPPFSEKFFL
VVIEKDSNNCSILHMWHLHLKSVQACLAKASEGVSSESLLSVPGQKNVDSSPETSPSMSP
MPHSSSIANLQTASKLILSSRLVYSQPLDLPVGVEVIRATPSAGHLSSSSIYPVCLAPYL
VVTTCSDNKVRFWKCSMETNLQCKSDEKETYHWRRWPLMNDEGEDNSSTVSIVGRPVAVS
CSYTGRLAVAYKQPIHHNGFVSKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVL
DSRVSVDSNLFVYSKSDALLSKDRYLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYG
RLSGIVTEQINSKDGVAVITLPLCGSIKQGVRSRWVLLRSIDLVSSVDGTPSLPVSLSWV
RDGILVVGMDCEMHVYAQWKHAVKFGDIDADGPDAEETAIQDHSAFKSNTLSRKSIVEGA
AIADDIFCSPTVAQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCI
AGEVAIVRDADAGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLYALL
AADQDTTYRISEESTKIPRSYEDHTESQPEDQYSELFQIQDITTDDIDLEPEKRENKSKV
INLSQYGPAYFGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENRDKS
YSGRDTLDECGLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELIN
MIPAIQRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKK
KAVVWGLFRSQHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLK
DAIEVCLEKMEDIQLAMVIARLYESDFETSSTYLSILNQKILGCQKDASGFDCKRLHPDP
FLRSLAYWVMKDYARALDTLLEQTPKEDDEHQVIKSCNPVVFSFYNYLRTHPLLIRRNLA
SPEGTLATLGLKTEKNFVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKVSA
LPSEKDQPDFIFKKTDDVPSESKTLSDGDRSSGIDWSNITSSQIDWSQPIVKVEEEPLTL
DWGEEHDSALEEEEEGAVGLVMKSTDVRGKDRQEDQEAPDRNMLLTPQEEDCLEGDSEVD
VIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKE
YASKMYSKVESDILDQEEMVDKPDIGSYEWHQIERRRLQAKREHAERRKLWLQKNQDLLR
VFLSYCSLHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTK
TVIANPVLYLNNHIHDILYTIVQMKTPPHPSIEDVKVHTLHSLAASLSASIYQALCDSHS
YSSQTEGNQFTGMAYQGLLLSDRRRLRTESIEEHATPSSSPAQWPGVSSLINLLSSAQDE
DQPKLNILLCEAVVAVYLSLLIHALATNSSNELFRLAAHPLNNRMWAAVFGGGVKLVVKP
QRQSENISAPPVPSEDIDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELS
MWDYFVAKPFLPLSDSGVIYDSDESIHSDEEEDDAFFSDTQIQEHQDPNSYSWALLHLTM
VKLVLHNVKNFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYVNT
YPTDLSVGAGPAILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEVLQQTFIRYIFT
KKRKQSEVEADLGYPGGKAKIIHKESDMIMAFSVNKANCNEIVLASTHDVQELDITSLLA
CQSYIWIGEEYDRESKSSDDIDYRGSTTTLYQPSATSHSASQVHPSSSLPWLGSGQTSIG
ASVLMKRNLHNVKRTTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVCFRQAGNARVTRLYF
NSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKATSDFAFVTSSSLVATSGQSN
DNRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGRKGCVCIFDIRQRQL
IHTFQAHDSAIKALALDPCEEYFTTXXAEGNIKVWRLTGHGLLHSFKNEHAKQSIFRNLG
AGVMQIDITQGNRIFSCGADGTLKTRVLPSAFNIPHSILDIL
NT seq
9129 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtcctcactggagctgtcaaccctggagacaactgctattccgtg
ggcagcgtcgaggatgtccccttcacggcatatggatcgggctgtgatattgttattttg
gcaaatgactttgaatgtgtgcagatcattcctggtgctaagcatggaaacatccaagtc
agctgtgtggagtgttctaaccaacatggaagagttgcagcttcatatggtaatgctgtt
tgtatttttgagcccttgggcataaattctcataagagaaattgtcaactcaagtgtcag
tggcttaaaactgggcagttttttttgagttccgtgacatacaatttagcatgggaccct
caagataacagattgttgacagcaactgattctattcagttgtgggctcctccaggaggt
gacattctggaagaggaggaagaaatcgataataaaattcctcctgttttaaatgattgg
aagtgcatctggcagtgcaaaacctcagtatctgtacatttgatggagtggtcccctgat
ggtgaatattttgctaccgctggaaaggatgattgtcttttgaaagtgtggtaccctatg
actggttggaagtcttcaattatacctctggatcatcatgaagtggaaaggagacaggcg
tctacccagttttcctttgtctacttggcacatccgcgagctgtgacaggtttttcatgg
cgtaaaactagcaaatatatgcccagaggttctgtctgtaatgtgttattaacttcatgc
catgatggtgtctgccggctatgggcagaaaccgtattaccagaagactgtcttttgggt
gagcagatttgtgagactaccacttccagcactgccagcaaccttactcatgctggaaga
cacaaagacagagtacaacatgctcttgagacaatacaccatttgaaaaatttaagaaaa
ggacaaaggaagtcttccattcttgtaactcacactgaattaatgcacgaccagatggca
acgcatgaagttcaaagacacatttcccatcacgcaaatgcactgtgtcattttcacatt
gcagcgagcatcaatcccaccacagatattccaaatgtcttggttggcactgtatttaac
attgatgatggaaatgggggctttgtagttcattggttaaacaacaaagaatttcatttt
acatcatctactgaaatatttatgcagcaattacgaaaactttctgaaaagcaggtagat
catgaaaatgacaaagcagatagagaagatgaggaacgttcacaggaggaaagagagagg
ggtttacgtatgaaactagaccatgaattatccctggatagagaatctgaagcaggtaca
ggatcatcagaacatgaagatggagaaagagagggaagtcctagaacctgttcacgacct
ggtgtaccaatgccactgcctacagtcctgcttgatcggagnnnnnnnnnnnnnnnnaag
atcgaaatgctgctaactgaatggaataagaatcctgacatgctttttactatacacccg
gtagatggtaccttcctagtgtggcatgtaaagtatttggatgaatataatcctggaata
tttagacaagtccaggtttctttttcttctcggattcctgttgcatttccatctggtgat
gcaagctctcttagtaaaaatatcatgatgtatgcctgtataaatgctacaaaagattct
caccacactctgttacatgaagacatgatggctgaatgcagtcctcatggatcacagctg
cattctggaccacacagtacaaatatgaacattttagctcccacagtaatgatggtctct
aaacacatagatggctctttaaatcaatgggcggtcacttttgctgataagtctgccttt
accactgttctaactgtatctcacaaatttagatattgtggtcatagatttcacctcaat
gacctggcatgtcattcagttttaccattattattgacatcatctcatcataatgctctg
ctgactcctgaatcggattttcagtgggactcagacaataaattaagtagattaatggat
cctgtaagacacataaagggttcctcgaaacagcctctcagaaatgcagcaacacgtaca
tttcatgacccgaatgccatctacagtgaacttattctgtggcgcgtggacccaatagga
cctttgtcatacaccggaggagtatcagagttggcgcgaattaactctttacatacttca
gccttctctaatgttgcttggcttccaactcttattcctagttactgtcttggcacatat
tgcaattctgcaagtgcttgctttgttgcttctgatggcaaaaatctgagactctaccaa
gctgtggtagatgcaaggaaattattggatgaactgtcagatccagaatcttcaaaactt
attggagaagtgtttaatattgtgagccaacagtctactgctcgacctggctgcattatt
gaactcaatgcaataaccaaccaatgtggctcaaatacacagttgcttcatgtgtttcaa
gaagacttcattagaggatataaaccacataaggaagatatggagaaaaaggaaacagaa
atattttttcaaccatcccaaggataccgaccaccaccattttcagaaaagttctttcta
gtagtaattgaaaaagacagcaataattgctctattctccatatgtggcaccttcatctt
aaatctgtacaggcatgtttagctaaagcttcagaaggtgtttcatcagagagtctactt
tcagtccctggacagaagaacgtagactcttctccagaaacctctcctagtatgagcccc
atgccacattcttcatcaattgccaaccttcaaactgctagtaaactgattctgagttct
agactggtatatagccaacctcttgatctcccagtaggagttgaagtaataagagcaacg
ccttcagcaggccacctgagttcctcttcaatttatccagtgtgcctggcaccttattta
gtggttacaacttgttctgacaataaagtacgcttctggaaatgtagtatggaaaccaat
ctacaatgtaaaagtgatgagaaggaaacctatcattggaggagatggcccttgatgaat
gatgaaggagaagataacagcagtacagtgagcattgtgggaagaccagttgctgttagc
tgttcatacacgggtcgccttgcagtggcttacaaacaacctatccatcacaatggtttt
gtttctaaagaattttccatgcatgtttgcatatttgaatgtgaatctacaggagggtca
gaatgggttttagaacaaacaattcatcttgatgatttggtcaaagtcgggagtgtactt
gattcaagggtcagtgtcgacagtaatctctttgtgtacagcaaatcagatgcacttttg
agcaaggatagatatcttattccgaatattaaacatttagtacatttggactgggtatca
aaagaagatggctcccacattctcacagtaggggtcggtgctaatatcttcatgtatggg
cggctttcaggaattgtgactgagcaaatcaatagtaaggatggagtagctgtcattact
ttaccactatgtggaagtatcaagcaaggagttaggtcaagatgggttcttcttagatct
atagacttagtgtcttctgttgatggtacaccttcactgcctgtttctctctcttgggta
agagatgggatattggtggtaggaatggattgtgaaatgcatgtatatgcacagtggaag
catgctgtcaaatttggagacattgacgctgatggtcctgatgcagaagagacagcaata
caagatcattctgcctttaagtctaatacgttgtcaagaaaaagtattgttgagggagca
gctattgctgatgatattttttgttcaccaactgtagctcaagatggtggcttatttgag
gctgcacatgtactttcccctactctcccgcagtatcatccaacccagctgttagaattg
atggatttagggaaagttcgcagggctaaagctattctctctcatttagtaaaatgcatt
gcaggagaagttgcaatagttagagatgctgatgctggagaaggaactaagcgacatctt
tctcgaaccattagtgtaagtggcagtacagcaaaggatacagtcaccataggtaaagat
ggtactcgagattatactgagatagactctattcctccactaccgttatatgcattgctt
gctgccgatcaagatacaacctacagaatttcagaagaaagtacaaaaataccacggagc
tatgaagatcatacagaaagtcaaccagaagatcagtattcagagctgttccaaatccag
gatataacaacagatgatattgacttagagccagaaaaaagagaaaacaaatcaaaagta
ataaatctttctcaatatggaccagcttactttggccaagaacatgctagggtactttca
agtcatcttatgcactcaagtctcccaggccttacccgtttggagcagatgttccttgta
gctttggctgatacagtggctaccaccagtactgagcttgatgaaaacagagataagagt
tactcaggaagagacacattagatgagtgtggtttgcggtacttactagctatgcgcttg
cacacttgccttttgacatcactgcctcctttataccgagtacagctacttcatcaaggt
gtgtctacttgccatttcgcctgggcttttcattctgaggctgaggaagagctgattaat
atgattccggcaattcagagaggggaccctcagtggtctgagttaagagctatgggaata
ggttggtgggtcaggaatattaacactcttcgaagatgcattgaaaaggttgccaaagct
tcttttcaaaggaacaatgatgccttggatgctgcattattctacctttcaatgaagaag
aaagcagtagtgtggggtttgtttaggtcacagcacgatgaaaaaatgacaacatttttc
agccacaactttaatgaagatagatggcgtaaagccgctttgaaaaacgctttctcttta
cttggaaaacaacgctttgaacaatctgctgcttttttcttgttagctggttcattgaaa
gatgccattgaggtatgtcttgaaaaaatggaagatatccagctagccatggtaattgcc
cgtttatatgaatctgattttgagacttcatccacttatctatccatcctaaatcagaag
attttgggttgccaaaaggatgcctcaggattcgattgcaaaagattacatcctgatcct
ttcttacgcagtcttgcctactgggtaatgaaagattatgcccgagccttggacacgtta
ttggaacaaacaccaaaggaggatgatgaacatcaagttatcaaatcttgtaacccagtg
gtgtttagtttctacaactaccttcgaactcatcctttgcttattcgaagaaaccttgcc
tcccctgaaggaactttggcaaccttaggtctcaaaacggagaagaactttgttgataaa
attaatctcatagaaagaaaattattctttactacagcaaatgctcattttaaagttgga
tgtcctgttttagccttggaggtgctctccaaaattccaaaagttaccaaagtgtctgcc
ttaccttcagaaaaagatcagcctgacttcatttttaaaaagacggatgatgtaccttca
gaatcaaaaactctgagtgatggtgatagaagttctggaattgattggtcaaacataact
tcatcacagattgactggagtcagccaatagtaaaagttgaagaggaacctcttactctt
gactggggtgaagagcacgatagtgccttagaagaagaggaagaaggtgctgtcggttta
gtaatgaaaagtacagatgtcaggggaaaagatagacaagaagatcaggaagccccagac
cgtaatatgttattgactcctcaggaagaggattgccttgaaggtgattctgaagttgat
gtgattgctgaacaactaaaattcagagcttgtttaaagatccttatgactgaactaaga
acattggctacaggttatgaagtagatggtggaaaactcagatttcaactctataactgg
cttgaaaaggaaattgctgccttgcatgagatatgtaatcatgaatcagttattaaagaa
tatgccagtaaaatgtattccaaagtagagagtgatattctggatcaggaagaaatggtg
gacaaaccagatattggttcctatgagtggcaccaaatagaaaggcggagactacaggct
aaacgagagcatgcagaaagacggaagttgtggttgcagaagaaccaagatctcctcaga
gtgtttcttagttactgtagccttcatggggcccaaggtggtggtctggcctcagtaagg
atggaactcaagtttttgctacaagaatcacagcaggaaactacagtgaagcagctccag
tctccactaccactgcctaccaccctacctctgctttcagcaagtattgcttcaacaaaa
acagtcatagctaatcctgtattgtacttaaataatcacatccatgatatactttatact
attgttcagatgaaaacaccacctcatcccagtattgaagatgtgaaggtgcacacactt
cattcactagcagcatcactttctgcatcaatttaccaagcattatgtgacagtcatagc
tacagcagtcagacagaagggaaccagtttacaggaatggcttatcaagggcttctttta
agtgatcgtcgaaggctaaggacagaaagcattgaagaacatgcaacaccaagttcttct
cctgctcaatggcctggtgtgagttcacttattaatctcttgagttcagcccaagatgaa
gaccagccaaaattgaatattttgttgtgtgaagctgttgttgctgtgtacttaagttta
ttgatacatgctcttgccacaaattcctccaatgaattatttcgacttgcagcccaccca
ttaaacaatcgaatgtgggctgctgtttttgggggaggtgtaaaacttgttgtgaagcct
caaagacaatcagaaaatatttcagcacctcctgttccttctgaagacatagataaacac
cgcaggaggtttaacatgcgaatgctggttcctggaagacctgtaaaggatgctacccca
ccaccagtgcctgcagaaagaccatcttacaaagaaaagtttattcctcctgaactcagt
atgtgggattattttgttgcaaagccatttctccctttgtctgatagtggagttatatat
gattctgatgaaagcattcatagtgatgaagaagaagatgatgcttttttttcagataca
cagatacaggaacaccaagaccctaactcctatagctgggctcttctacatttgacaatg
gttaagctagtacttcacaatgtcaagaatttctttcccatcgctggattggaattctct
gagttgcctgtaacatcaccattaggtattgctgtgattaaaaacttggagaattgggag
cagatcttgcaagagaaaatggatcaatttgaaggtcctccccccaactatgtcaacaca
tatccaactgacctttcagtaggagctggaccagctattcttcgaaataaagcaatgcta
gaacctgaaaatactccattcaaatcccgggattcttctgcgcttccagtcaaacgactt
tggcatttccttgttaaacaagaagtacttcaacagacatttattagatatattttcact
aagaaaagaaagcagagtgaggttgaagcagatctgggctatccaggaggaaaggcaaaa
atcattcataaggagtcagatatgatcatggcattttctgttaataaggcaaactgtaat
gaaattgttttggcttcaacgcatgatgtacaagaacttgatattacttctctactggcc
tgtcagtcatacatatggattggagaagaatatgacagagaatccaaaagttcagatgat
attgattatcgtggttccactacaactctttatcaacccagtgcaacatcccattcagca
agtcaggtgcatccatcttcatctctgccgtggctgggcagtgggcagactagcattgga
gctagtgtgcttatgaaaaggaatctacataatgttaagagaacgacctcacacccagtc
catcaatactatcttacaggtgctcaggatggcagtgtacgaatgtttgaatggacaaga
cctcagcagcttgtctgtttccgccaagctggcaatgcaagagttaccagattatatttc
aattcacaaggcaacaagtgtggtgtcgcagacggagagggttttctgagtatctggcaa
gtaaaccaaactgcatcaaatcccaaaccttacatgagttggcagtgccacagtaaagcc
acaagtgactttgcatttgttacctcttcaagtctagttgccacatctggacagtccaat
gacaatagaaatgtatgcctctgggacacattgatatcacccggaaacagccttattcat
ggtttcacatgccatgatcacggtgccacagtgcttcagtacgcgccaaaacagcaactc
ctaatatctggaggcaggaaaggctgcgtctgcatttttgacatcaggcagagacagcta
attcacacattccaggcacatgactctgcaattaaggctctggctctcgatccctgtgag
gaatattttactacannnncagcagaaggtaacataaaggtttggaggttgacaggccat
ggcctacttcattcatttaaaaatgaacatgctaaacagtccatattcagaaaccttggg
gctggagtcatgcagatcgacatcacccagggcaaccggatcttctcctgtggggcagac
gggacgctgaaaacgagggttttgcccagtgcttttaacatccctcatagcattcttgac
attctatag
DBGET
integrated database retrieval system
