Balaenoptera acutorostrata scammoni (minke whale): 103006970
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Entry
103006970 CDS
T03086
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
bacu04142
Lysosome
bacu04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103006970 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103006970 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
103006970 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bacu02000
]
103006970 (NPC1)
Transporters [BR:
bacu02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103006970 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
103006970
NCBI-ProteinID:
XP_007197687
UniProt:
A0A384BD80
LinkDB
All DBs
Position
Un
AA seq
1277 aa
AA seq
DB search
MSACGPALGLLLLLLCPAQVLSQSCVWYGECGIASGDKRYNCRYSEPPKPLPEDGYDLVQ
ELCPGFFFGNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLVNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACKDVEAPSSNEKALGLLCGKE
AEACNATNWIEYMFNKDNGQAPFTITPIFSDLPAHGMEPMNNATKGCDESVDEVMGPCSC
QDCLIVCGPKPQPPALPVPWRILGLDAIYSVMFTSWNFFFFFFFIFFFFFFCSRKRYFVS
EYTPIDGNIAFSVNASDKGGPSCCDSLGATFEARLQRLFSQWGSFCVRHPGCIVFFSVAF
IAACSSGLVFVQVTTDPVDLWSAPGSQARQEKEYFDTHFGPFFRTEQLIIQAPLTQPHTY
SPVPSGADVSFGPPLALDILHQVLDLQTAIENITASYNNETVTLQDICLAPLSPYNKHCT
IMSVLNYFQNSHSVLDHKVGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYCNDTEKLQRAQAWEKEFINFVKNYKNPNLT
ISFKAERSIEDELDRESNSDIFTILISYGIMFLYISIALGHIKSCSRFLVDSKISLGIAG
ILIVLSSVACSLGIFSYIGIPFTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQVGRVLGEVAPSIFLSSFSETVAFFLGGLSVMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDIKRQEKNRLDVLCCVGDAADSAGIQASESCLFHFFRNAYAPLLLKDWMRPIVVA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVTDYFQSLNRYLHAGPPVYFVVEGGHDYA
SLKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFPPSSWIDDYFDWVKPQSSCCRVY
NSTDRFCNASVVDPACVHCRPLTPEGKQRPQGADFMRFLPMFLSDNPNPKCGKGGHAAYS
AAVNILGNGTGVGATYFMTYHTVLKTSADFIDAMEKARLIASRITRTMGLEGSDHRVFPY
SVFYVFYEQYLTMIDDTIFNLGVSLGAIFLVTVVLLGCELWSAVIMCITIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIMVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSISKARSL
AAQERYRGTEREQLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtgcggcccggccctcggcctcctcctgctgctgctctgcccggcacaggta
ctttcacagtcctgtgtttggtatggagagtgtggaattgcatctggagataagaggtac
aattgcagatattctgagccaccaaagccgttgccagaggatggctatgacctggtgcag
gaactctgtccagggttcttcttcggcaacgtcagtctttgctgtgatgttcagcagctt
cggacactgaaagacaacctgcagctgcctctgcagtttctgtccagatgtccatcctgt
ttttataacctagtgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaacgttacagcaacggaagattatgttgatcctgttacaaaccagacaaaaacaaac
gtaaaagaattacaatactatgttggagagagttttgccaatgccatgtacaatgcctgc
aaggacgtggaggccccctcgagtaacgagaaagccctggggctgctgtgcgggaaggag
gccgaagcctgcaacgccaccaactggatcgagtacatgttcaacaaggacaacggccag
gcgcctttcaccatcacgcccatcttttcagatcttccagcccatgggatggagcccatg
aacaatgccaccaagggctgtgatgagtccgtggatgaggtcatggggccctgcagctgc
caggactgcttgatcgtctgtgggcccaagccccagcccccagcccttcctgttccctgg
agaatcctgggtctggacgctatttattcagttatgtttacatcatggaatttttttttt
ttttttttttttatatttttttttttttttttttgttccagaaaacggtattttgtctcc
gagtacacccccattgatggcaatattgctttctctgtaaatgccagtgacaaagggggg
ccgtcctgctgtgactctctgggtgccaccttcgaggcccgtctacagcggctcttctca
cagtggggctcgttctgcgtccgacaccctggctgcatcgtgttcttctccgtggccttc
atcgccgcctgttcttcgggcctggtgtttgtgcaggtcacgacagacccggtggacctg
tggtctgcgcccggcagccaggcgcgccaggagaaggagtacttcgacacacacttcgga
ccgttcttccgcaccgagcagcttatcatccaagcccccctcacacagccgcacacgtac
agtcccgtcccctctggagccgatgtgtcctttgggcctccacttgccctagacattttg
caccaggttcttgacttacaaacagccatcgagaacattactgcatcttacaacaacgag
actgtgacactccaggacatctgcttggcccccctctcaccatataacaagcactgcacc
atcatgagcgtgttaaattacttccagaacagccattccgtgctggaccacaaagtagga
gacgacttctttgtgtacgcggattaccacacacacttcctgtactgcgttagggctccc
gcctccctgaatgacaccagtttgctccacgatccttgcctggggacctttggtggacca
gtgttcccgtggcttgtgttaggaggctatgatgatcaaaactacaataacgccacagcc
ctggtgattacctttcctgtcaataattactgtaacgatacagagaagctccagagggcc
caggcctgggaaaaagagtttattaattttgtgaaaaactacaagaatccaaatctgacc
atttcttttaaggctgaacgaagtattgaagatgaactagatcgtgaaagtaacagtgat
atcttcactattctaatcagctatggcatcatgtttttatatatttccatagccttgggg
catatcaaaagctgtagcaggtttctggtggattcgaaaatctccctgggcatcgcgggc
atcctgatcgtgctgagctcagtggcgtgctccttgggcatcttcagctacattgggatc
cccttcaccctcattgtgatagaagtcatcccgttcctggtgctggctgtgggagtggac
aacatcttcattctggtccagacctaccagagagatgaacgtctccaaggggagacgctg
gaccagcaggtgggccgggtgctgggagaagtggctccaagtattttcctgtcgtccttt
tcagagacggtagcatttttcttaggaggcctgtccgtgatgccagctgtgcacaccttc
tccctctttgcggggatggcggtcctcatcgacttcctcctccagattacctgctttgtg
agtctcttgggattagacattaagcggcaagagaagaaccggctggatgtcctctgctgt
gtcggggacgcggcagacagcgcaggcatccaggcctcggagagctgcttatttcacttc
ttcagaaacgcctatgctccacttctgcttaaggactggatgcggcccattgtggtagcg
gtatttgtgggtgttctgtcattcagtatcgcagtcctgaacaaagtagaaatcggcttg
gatcagtctctgtcaatgccagatgactcctacgtgacggattatttccagtccctcaat
cgctacctgcacgcgggcccgcccgtgtactttgtcgtggagggagggcacgactacgct
tctctgaaagggcagaacatggtgtgtgggggcctgggctgcaacaacgactcgctggtg
cagcagatcttcaccgccgcccagctggacaactatacccggataggctttcctccctcg
tcctggattgacgattattttgactgggtcaagccacagtcgtcttgctgtagagtctac
aacagcacggatcggttctgcaatgcgtcagtggttgaccctgcctgcgtccactgccga
cctctgactccagagggcaagcagaggcctcagggcgcagacttcatgaggttcctgccc
atgttcctctccgataacccgaaccccaagtgtggcaaagggggacacgccgcttacagc
gcagcagttaacatcctcggcaacggcacgggcgtcggagccacgtacttcatgacctac
cacacggtactcaagacctccgctgacttcatcgacgccatggaaaaggcccgcctcatc
gccagcagaatcaccagaaccatgggcctggaaggaagtgatcaccgtgtgttcccatac
agtgtgttctacgtcttctacgaacagtacctgaccatgattgacgacactatctttaac
ctcggcgtgtccctgggcgccatctttttggtgacggtggttctcctgggctgtgagctg
tggtcggcggtgatcatgtgcatcaccatcgctatgatcttggtcaacatgttcggtgtc
atgtggctctggggcatcagtttgaatgcggtttctttggtcaacttggttatgagctgt
ggcatctccgtggagttctgcagccatatcacgagagcattcacggtgagcacgaaggga
agccgcgtggaacgggcagaagaggcgctctcccacatgggcagctctgtattcagtgga
atcacactaacaaaatttggaggcattatggttttggcctttgccaaatctcaaattttc
cagatattttacttcaggatgtatttagctatggtcctactgggagccactcatggatta
atattcctccctgtcttgctcagttacataggaccatcgataagtaaagccagaagtctg
gccgctcaggagcgatacagaggtacagagcgagagcagcttctcaatttctag
DBGET
integrated database retrieval system
