Balaenoptera acutorostrata scammoni (minke whale): 103007000
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Entry
103007000 CDS
T03086
Symbol
EXOSC1
Name
(RefSeq) exosome component 1
KO
K07573
exosome complex component CSL4
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103007000 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103007000 (EXOSC1)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103007000 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103007000 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
103007000
NCBI-ProteinID:
XP_007187484
UniProt:
A0A384AJU4
LinkDB
All DBs
Position
Un
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLIKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatccccggcgaacgtctgtgtaacttggaagagggc
agcccgggcagcggcacctacacccggcatggctacatcttttcgtcgcttgctggctgc
ctgataaagagcagcgagaacggcgcgcttcctgtcatatctgtgatgagagaaacagag
tcccaattactgccagatgtgggagctattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaggaagacgtccgagctactgaaaaagacaaggttgaaatttataag
agtttccgcccaggggacattgtcttggccaaagtgatctccctaggtgatgcgcagtcc
aactacctcctaaccactgccgaaaatgagctgggagtggtggtggcccacagtgaatcg
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggcccgagtacagcctgaattcttacagacctaa
DBGET
integrated database retrieval system
