Balaenoptera acutorostrata scammoni (minke whale): 103008292
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Entry
103008292 CDS
T03086
Symbol
RAD50
Name
(RefSeq) RAD50 double strand break repair protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03440
Homologous recombination
bacu03450
Non-homologous end-joining
bacu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103008292 (RAD50)
03450 Non-homologous end-joining
103008292 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103008292 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacu03032
]
103008292 (RAD50)
03400 DNA repair and recombination proteins [BR:
bacu03400
]
103008292 (RAD50)
DNA replication proteins [BR:
bacu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103008292 (RAD50)
DNA repair and recombination proteins [BR:
bacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103008292 (RAD50)
BRCA1-C complex
103008292 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
103008292 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
AAA_15
SMC_N
DUF1664
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
103008292
NCBI-ProteinID:
XP_007188612
UniProt:
A0A384AML3
LinkDB
All DBs
Position
Un
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVECQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMRARDSLIQSLATQLELDGFEHGPFSERQIKNFHKLVRERQEKEAETARLLMNDFAE
KETLKRKQIDEIRDEKTGLGRIIELKSEILTKRQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTATRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEKLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDEDQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIIP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVSPLEATLEKFQQEKEELINKRNTSNKIAQDKINDIKEKVKNIHGYVKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHREKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIENIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTPLDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSISSLGSNVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggataaa
gataaacaaattatcacattcttcagtcccctcacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacattcgttcatgatcccaaggttgctcaagaaacagatgttagagca
cagattcgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtttgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggcgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggtgtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gagtctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgagattttt
tccgcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgcgatcagattactagtaaggaagcccagttaacatcgtcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggatagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggtct
gatgagcagctaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agactggtagaatgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctacaagcagatcgtcat
caagaacatatgcgagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttgagcatggaccattcagtgagagacagataaaaaattttcacaaacttgtg
agagagagacaagaaaaggaagcagaaaccgccaggctactgatgaacgactttgcagaa
aaagagactctgaaacgaaaacagatagatgagataagggatgagaaaactggactagga
agaataattgagctaaaatcagaaatcctaactaagaggcagaatgagctgaaaaatgtg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaagctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagatctagacaggaccctgcgtaaa
ttggaccaggagatggagcagttaaatcatcatacagcaacacgtacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagattggctt
catagtaaatcaaaggaaattaatcagaccagggacagacttgccaaattgaacaaggaa
ctggcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
aagttgtccagctatgaagacaaactgtttgatgtttgtggtagccaggattttgaaagt
gacttagacaggcttaaagaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagctacggcagtttactcgcaattcattactcagctaacggatgaagaccagtcgtgt
tgccctgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtctaagctgaggcttgctccagataagctcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactagtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggtacgatcatacct
gaggaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggttccagatg
gaacttaaggatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatagaactgttcaacaggtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacaaatt
cagcacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttatacagagaaataaaggatgctaaagagcaggtaagccctttggaagcaacattggaa
aagttccagcaggagaaagaagaattaatcaacaaaagaaatacaagcaacaaaatagca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatggttatgtgaaagac
attgagaattatattcaagatggaaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgcgagaaacacagagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaaggaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagaaaatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgcc
gaggaaaagtatagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcgatctgatgccgatgaaaatgtatcagcttctgataaaaggcgg
aattacaactaccgagtggtgatgctaaagggagacacgcccttggatatgcgaggacga
tgcagtgccggacaaaaggtattagcttcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggatgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtgatcactcacgatgaagattttgtggagctcttagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagatcgtg
aaatgcagtattagttccctaggatctaatgttcattaa
DBGET
integrated database retrieval system
