Balaenoptera acutorostrata scammoni (minke whale): 103008389
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Entry
103008389 CDS
T03086
Symbol
ARID1A
Name
(RefSeq) AT-rich interaction domain 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03082
ATP-dependent chromatin remodeling
bacu04714
Thermogenesis
bacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103008389 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103008389 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103008389 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bacu03000
]
103008389 (ARID1A)
03021 Transcription machinery [BR:
bacu03021
]
103008389 (ARID1A)
03036 Chromosome and associated proteins [BR:
bacu03036
]
103008389 (ARID1A)
Transcription factors [BR:
bacu03000
]
Eukaryotic type
Helix-turn-helix
ARID
103008389 (ARID1A)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103008389 (ARID1A)
Chromosome and associated proteins [BR:
bacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103008389 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103008389
NCBI-ProteinID:
XP_007170522
UniProt:
A0A383Z649
LinkDB
All DBs
Position
Un
AA seq
1904 aa
AA seq
DB search
MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMG
GLSYAQQIPPYGQPGPSGYGQQGQAPYYNQQSPHPQQQQQPYSQQPPSQTPHAQPSYQQQ
PQSQPPQLQSSQPPYSQQPSQPPHQQSPTPYPTQQSTTQQHPQSQPPYSQPQAQSPYQQP
PPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKG
GQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSP
HTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQ
SSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGSQY
GPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGTLPPGRMSHASM
GNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGI
MGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNN
KADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPA
VGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAF
ECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPP
TPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGR
MSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGG
PYDRVRTEPGIGPEGNMGTAAPQPNLMPSNPDSGMYSPSRYPAQPQPQPQPQQQRHDSYG
NQFSAQGTPSSSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQP
QQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAATERRPAGGPQNQFPFQFG
RDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQG
AAYHGVNRTEEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQN
HIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDIT
FPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSRKSGLLAESTWALDTINILLYDDNS
IMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKASSPAPVE
GEEEEDLLGPKLEEEEEEEVIENDEEMAFAGKDKAASENSEEKLISKFDRLPVKIVQKND
PFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPSRPHVPCPPVTRKY
VTAVAGTPGTTEQEGPPTDGPPEKRITATMDDMLSTRSSTLTEEGAKSVEATKESSKFPF
GISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEM
SKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTL
VTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLET
LSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLA
ARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLAL
AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgggcaagatgagacctcagccatacggcgggactaacccatactcgcaa
caacagggacctccatcaggaccgcagcaaggacatgggtacccagggcagccatatggg
tcccagaccccgcagcggtacccgatgaccatgcagggccgagcgcagagtaccatgggc
ggcctctcttacgcacagcagattccaccttatggacagccaggccccagcgggtatggt
cagcagggccaggctccgtattacaaccagcaaagccctcacccccagcagcagcagcag
ccctactcccagcagccaccatcccagacccctcacgcccagccttcatatcagcagcag
cctcagtctcagccaccgcagctccagtcctctcagcctccgtattcccagcagccatcc
cagcccccccatcagcagtccccaaccccgtaccccacccagcagtccaccacccagcag
cacccccagagccagcccccctactcacagccgcaggcacagtctccttaccagcagccg
ccacctcagcagccagcatcctcgacgctttcccagcaggctgcgtaccctcagccccag
tctcagcagtcacagcaaactgcctattctcagcagcgcttccctccaccacaggagtta
tctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaaggga
gggcaagaagatatgaacctgagtcttcagtcaagaccttcaagcttgcctgatctgtct
ggttcaatagacgatctccccatggggacagaaggagctctgagccctggagtgagcaca
tcagggatttcaagcagccaaggggagcagagtaatccagctcagtctcctttttctccc
catacctcccctcacctgcctggcatccgaggcccctccccgtccccagtcggctctcct
gccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccag
atgccacctcggccacccagtggccagtcggacagcatcatgcatccttctatgaaccaa
tcaagcattgcccaagatcgaggttacatgcagaggaacccccagatgccccagtacagt
tccccccagcccgggtcggccttatctccacgtcagccttctggaggacagatgcacaca
ggcatgggctcctaccagcagaactccatggggagctatggtccccaggggagtcagtac
ggcccacagggaggctaccccaggcagccaaactataatgccttgcccaatgctaactac
cccagtgcaggcatggctggaagcatgaaccctatgggtgctggaggtcagatgcatggg
cagcctggcatcccaccttacggcacactccctccagggagaatgagtcatgcctccatg
ggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcagggatg
tgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgccatgcacgtt
gctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggcata
atgggaactggacctccctatggacaagggattaatagtatggctggcatgatcaaccct
cagggacccccatatcccatgggtggaaccatggccaacaattcagcagggatggcagcc
agcccagagatgatgggtcttggggatgtcaagttaactccagccaccaaaatgaacaac
aaggcagatgggacacccaagacggaatctaaatccaagaaatccagttcttctactaca
accaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgg
gtggaccgttatctggccttcacggaggagaaggccatgggcatgacaaatctgcctgct
gtgggtaggaaacctctggacctgtaccgcctctatgtgtctgtgaaggaaattggtgga
ttgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaatgtcggc
acctcgagcagtgctgccagctccttgaaaaagcagtacatccaatgtctttatgccttt
gagtgcaagatcgaacggggagaagaccctcccccagacatctttgcagctgctgattcc
aagaagtcccagcccaagatccagcctccctctcctgcgggatcagggtcaatgcagggg
ccacagacacctcagtcaaccagcagttccatggcagaagggggagacctgaagccacca
actccagcatccacaccacacagccagatcccccccttgccaggcatgagcaggagcaat
tcggtcgggatccaggatgcctttcctgatggaagtgaccccacattccaaaagcggaat
tccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatgatggggcgc
atgtcctacgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgat
cccttcatgtcctcaggtcagggccctaacggcgggatgggggacccctacagtcgagct
gccggccctgggctgggaaatgtggcaatgggaccgcgacagcactatccctatggaggt
ccttatgacagagtgaggacggagcccggaataggacccgagggaaacatgggcactgca
gccccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagccgt
taccccgcgcagccgcagccgcagccgcagccgcagcagcaacgacatgattcctatggc
aatcagttctccgctcaaggcaccccttccagcagccccttccccagccagcagaccaca
atgtatcagcagcagcagcagaattacaagcggccgatggatggcacatacggccctcct
gccaagcggcacgaaggggagatgtacagtgtgccgtacagcacggggcaggggcagccc
cagcagcagcagttgcccccggcccagccccagcctgccagccagcaacaagctgctcag
ccttcccctcagcaagacgtgtacaaccagtatggcaatgcctatcctgccactgccgcc
gctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggc
cgagaccgtgtctcagcaccccctggctccagtgcccaacagaacatgccaccgcagatg
atgggcggccccatacaggcatcggctgaggttgctcagcaaggcaccatgtggcagggg
cgtaatgacatgacctacaattacgccaacaggcagagcacgggctctgccccgcaaggc
gctgcctatcatggcgtgaaccgaacagaggaaatgctgcacacggatcagagagccaac
catgaaggcccatggccttcccatggcacacgccagcccccatatggtccttctgccccc
gtgccccccatgacaaggccccctccatccaactaccagcccccaccaagcatgcagaat
cacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacctct
cctagcaagtctccattcctgcactctgggatgaagatgcagaaggcaggtcccccagta
cctgcctcacacatagcacctgcccctgtgcagccccctatgattcggcgggacatcacc
ttcccacctggttctgttgaagcaacacagcctgtgttgaagcagaggaggcggctcacg
atgaaagacatcggaaccccggaggcatggcgggtaatgatgtcccgcaagtctgggctg
ctggcagagagcacgtgggcattagacaccattaacatcctgctgtatgatgacaacagc
atcatgactttcaacctcagtcagctcccagggttgctagagctccttgtggaatatttc
cgacgttgcctgattgagatctttggcattttaaaggagtatgaggtgggtgacccagga
cagagaacactactggaccctgggagattcagcaaagcatctagtccagctcctgtggag
ggggaggaggaggaagaccttctaggtcctaaactagaggaggaagaagaggaggaagta
attgaaaatgatgaggagatggcctttgcgggcaaggacaaagccgcctcagagaatagt
gaggagaaactgattagtaagtttgacaggcttccagtaaagatcgtgcaaaagaatgac
ccgtttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggcttg
ctgcactggcggattggtgggggggacaccactgagcatatccagacccactttgagagc
aaaacagagctgctgccttcccggcctcatgtaccctgcccaccagtcactcggaagtat
gtcacagcagtagcgggtacaccagggacaacagagcaggagggccccccgaccgatggc
cctccagaaaaacggatcacagccactatggatgacatgttgtccacccggtctagcacg
ttgaccgaggagggagctaagagtgtagaggccaccaaggaaagcagcaagttcccattt
ggcatcagcccagcacagagccatcggaacatcaagatcctagaggatgaaccccacagt
aaagatgagaccccactgtgtacccttctggactggcaggattcccttgccaaacgctgc
gtctgtgtctccaataccatccgaagtctgtcatttgtaccaggcaacgacttcgagatg
tccaaacacccggggctgctgctgatcctgggcaagctcatccttctgcaccacaagcac
ccagaacggaagcaggcgccactgacttacgagaaggaggaggagcaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaaaacaccttg
gtcacgctcgccaacatttcggggcagttggacctctccccataccccgagagcatttgc
ctgcctgtcctggatggactcctacactgggcagtctgcccttcagctgaagcccaggac
cccttctccaccctgggccccaacgccgtcctctccccccagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacaccccccttc
agccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccg
gtgtgccgggagatggctgtagtactgctagccaacctggcacagggtgacagcctggca
gcccgtgccattgcagtgcagaaaggcagcatcggcaacctcctgggcttcctggaggat
agccttgctgccacacagttccagcagagccaggccagcctgctccacatgcagaacccg
ccctttgagccaactagtgtggacatgatgcgacgggctgcccgtgcgctgctggccctg
gccaaggtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggacatc
tcggtatcaccgttgatgaactcattggtttcacaagtcatttgcgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system
