Balaenoptera acutorostrata scammoni (minke whale): 103009037
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Entry
103009037 CDS
T03086
Symbol
VPS18
Name
(RefSeq) VPS18, CORVET/HOPS core subunit
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04140
Autophagy - animal
bacu04148
Efferocytosis
bacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103009037 (VPS18)
04148 Efferocytosis
103009037 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103009037 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bacu04131
]
103009037 (VPS18)
Membrane trafficking [BR:
bacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103009037 (VPS18)
Hops complex
103009037 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
103009037
NCBI-ProteinID:
XP_007180445
UniProt:
A0A383ZZ99
LinkDB
All DBs
Position
Un
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAFLQPGCPSVGIPHSGYVNAQLEKEVPIFTRQRIDFTPSERITSL
VISCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYQVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHHACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNNHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctctcccgctcggccttcttgcagccc
ggctgccccagcgtcggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaggcagcgcattgactttaccccttctgagcgtatcaccagtctt
gtcatctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ttaggcaaagcaaatgaacccaaccacatggagctgggacgcaaggatgatgccaaagtt
cacaagatgttcctggaccctactggctctcacctgctgatcgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaagttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggtaccgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatctttgaagcagagctctcggccagtgagggtggg
cttttcggccctgccccagatctctacttccgtccgttgtatgtgctaaatgaagaaggg
ggcccagcacctgtgtgctccctcgaggcggagcggggccctgaagggcgtggctttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagcagccgagggagctgag
gcccaaggcttctcggggctctttgctgcctacactgaccacccacccccattccgtgag
ttccccagcagtctgggctacagtgagctggccttctacacccccaagttgcgctctgcg
ccccgggccttcgcctggatgatgggggatggcgtgttgtatggctcgttggactgcggg
cgtcccgactccctgctgagcgaggagcgggtctgggagtacccagagggggtgggtcct
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcggtgtgcacgctgacggggcaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaaacacatggtgaaggactcctccacgggccacctgtgggcc
cacaccgagcgggccgtcttccgctaccaggtacagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagagcggcctgac
tgcctggacacggtcctggcccgggaggccgacttctgcttccgccagcatcgttacctg
gagagtgcccgctgctatgccctgactcagagctactttgaggagattgccctcaagttc
ttggaggcccaccaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgctgagcgcacccaggccacgctgcttaccgcctggctgacggagctctacctg
agccgactcggggccctgcagggtgaccctgaagccctgaacctctaccgggaaacccgg
gagcgtttccgcgccttcctgagcagcccccgccacaaggagtggctcttcgctagccgg
gcctccatccacgagctgctcgccagccacggggacacagagcacatggtatacttcgct
gtgatcatgcaggactacgagcgcgtggtggcataccactgtcagcatgaggcctacgag
gaggccctggccgtgctggcccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatccctcgccagctggtggacgcctggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggcgagactgag
caggccattcacaattacctgctgtcgctctatgcccgaggccagccagcctcgctgctg
gcctacctcgagcaggccggggccagcccgcaccgggtgcattatgacctcaagtatgcg
ctgcggctctgtgctgagcatggccaccaccatgcttgcgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggacgtggacctggccaagcag
tgtgctgacctgcccgaggaagatgaggagctgcgcaagaagctgtggctgaagatcgct
cggcatgtggtgcaggaggaggaggatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggacgtgctgcctttcttccctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctgaaggcttacaacaaccacatccaagagctgcag
cgggagatggaagaggccacggccagcgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcaccgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgccttctg
caggccgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctacagcga
aagctgggcgctgctccaccccctgccaagggctctgcccgggctaaggaggccgagggg
ggcgctgccaccggggggcccagccgggaacagctcaaggctgacctggatgaactggtg
gccgctgagtgtgtgtactgtggggaactgatgatccgctctattgaccggcccttcatc
gaccctcagcgctacgaggaggagcacctcagttggttgtag
DBGET
integrated database retrieval system
