KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103009652
Entry
103009652         CDS       T03086                                 
Symbol
KDM5D
Name
(RefSeq) lysine (K)-specific demethylase 5D
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bacu01009]
    103009652 (KDM5D)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bacu03036]
    103009652 (KDM5D)
Enzymes [BR:bacu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103009652 (KDM5D)
Protein phosphatases and associated proteins [BR:bacu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103009652 (KDM5D)
Chromosome and associated proteins [BR:bacu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103009652 (KDM5D)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD YPEB_N
Other DBs
NCBI-GeneID: 103009652
NCBI-ProteinID: XP_007187706
LinkDB
Position
Un
AA seq 1547 aa
MEPGTDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFKFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKMPNVERRILDLYSLSKIVM
EEGGYEAICKDRRWARVAQRLSYPPGKNIGSLLRSHYECIIYPYEMFQSGANLVQCNTQP
FDSEEKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLVAKDKTLRKKDKEGVVCPSTVTMKEEPSGNWKVMSALPKEDSSNSLEPCT
NMTMQLRKNQSNTQFIDSYVCRMCSRGDEDDKLLLCDGCNDNYHIFCLLPPLPEIPRGVW
MCPKCIMAECKKPPEAFGFEQATQEYTLQSFGEMADSFKVDYFNMPVHMLHTELVEKEFW
RLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKGNLSPEEEEYANSGWNLNVMPVLDQSV
LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLE
EVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFLPAYHSGFN
QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAV
YKEMFIMVQEERRLRKSLLDKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPD
GLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAKSFDTWANKVRVALEVEDG
RKRSFEELRALESEARERRFPNSELLQRLTNCLNEAEACVSQVLGLVSGQESGPRSIETP
QLTLTELRVLLEQMGSLPCAMRQMRDVKDFLQQVEDYQAEAREALASLPPSLGQLRSLLE
RGQQLGVEVPEARQLQQQVEQARWLDEVKQALDPSAQRGSLVIMQGLLVTGAKVASSPFV
DKARAELQELLTIAERWEEKAHFCLEARQKHPLATLEAIIRETENIPVHLPNIQALKEAL
TKAQAWIADVVEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELKQLELQVLTAHSWREKAS
KMFLKKNSCYTLLEVLCPCADTGSDRTKRSWWMEKEMGLYKSDTELLGLSAKDLRDPGSV
IMAFKEGEQKEKEGILQLRHTNSAKLSPSTTASSATSICVCGQMPAGVEALQCDLCQDWF
HGRCVSVPRLFSSLRPSATSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLP
VRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEEPPTYPS
APASDPLREGSGKDMPKVQGLLENRDSVSSPEKVAAGYDLYKTDLEQFSSVLPQLIGPVL
ELPEATRAPLEELMLEGDLLEVTLDENHSIWQLLQAGQPPDLARIRTLLELEKPEHQGSR
IRGQVLEKRRRRQRKADLGRKSERIVQEEVESKKARSSQIKPEEGQEEEEFEEGTDCENT
FMTPPAEHNPILKGNQNNLEEKDSAPTTPFPSLTPLVHLSYPEQQEL
NT seq 4644 nt   +upstreamnt  +downstreamnt
atggaaccggggacggacgacttcctaccgccgccagagtgtccggtgttcgagcccagt
tgggcagaatttcgagaccccctcggctacatcgcgaaaatcaggcccattgccgagaag
tccggtatttgcaagattcgcccacccgcggactggcagcctccctttgcagtagaagtt
gacaacttcaaatttactccacgcatccagaggctaaatgaactagaggctcagaccaga
gtgaaactgaattatttggaccagattgcaaaattctgggaaattcaaggttcttcttta
aaaatgcccaatgtggagcggaggatcttggacctctacagtcttagtaagattgtgatg
gaggaaggtggctatgaagccatctgtaaggaccgacgatgggcccgagttgcccagcgc
ctcagctacccaccaggcaaaaacattggctccctgctacgatctcactatgaatgtatc
atttatccttatgaaatgtttcagtctggagctaaccttgtgcagtgtaacactcagcca
tttgacagtgaggaaaaagacaaggaatacaaaccccacagcattccccttagacagtct
gtgcagccttcgaagttcagcagctatagtcggcgggcaaaaagactacagcctgatcca
gaacccacagaagaagacattgagaaaaacccagagctgaagaagctacaaatctatggg
gcaggtcccaagatgatgggcttgggcctcgtagccaaggataagactttacggaagaaa
gataaagaaggggtcgtatgcccctccactgttacaatgaaggaggaaccgagtgggaac
tggaaagtgatgtcagcattgcccaaggaggattcgagtaacagcctagagccctgcacc
aatatgaccatgcagctgcggaagaatcaaagcaatacccagtttattgactcatatgtt
tgccgaatgtgctctagaggggatgaagatgataaacttcttctttgtgatggctgtaat
gacaattatcacatcttttgcctattgccaccccttcctgaaatccccagaggggtctgg
atgtgcccaaagtgtatcatggcggagtgtaagaaacccccggaagcctttggctttgag
caggctacccaggagtacactttgcagagctttggtgaaatggctgattccttcaaggtg
gactacttcaacatgcctgttcatatgttacatacagaacttgtggagaaagaattctgg
aggctggtgagcagcattgaggaggatgtgacagttgagtatggagcagacattcattcc
aaagaatttggcagtggttttcctgtcagcagtagcaaaggaaacctgtcccctgaggag
gaggagtatgcaaacagtggatggaacctgaatgtgatgccagtgctggatcagtctgtt
ctttgccacattaatgcagatatctcaggcatgaaggttccctggctctatgtaggcatg
gtattctcagcattttgttggcatattgaggatcactggagttactccattaactaccta
cactggggtgagccgaagacatggtatggtgtaccctcactggcagcagagcatttggag
gaggtgatgaagaggctaacacctgagctctttgatagccagcctgacctcctacaccag
ctcgtcaccctcatgaatcccaacaccctcatgtctcatggtgtgccagttgtgcgcaca
aatcagtgtgcaggagaatttgtcatcactttccttccagcttaccacagcggctttaac
caaggctacaactttgcagaggctgtcaacttttgtactgctgactggctgcctgctgga
cgccagtgcatcgaacactaccgccgacttcggcgctactgtgtcttctcccatgaggag
ctcatatgcaaaatggctgcctttccagagaagttagacttgaacctggctgtggctgtg
tacaaggagatgttcattatggtgcaggaggagcgacgtttacgaaaatctctattggac
aagggcatcacggaggctgagcgagaggctttcgagctgctcccagatgatgaacgccag
tgcatcaagtgcaagacgacatgcttcctatcagccctggcctgctatgactgcccagat
ggccttgtctgcctttcccacatcaatgacctctgcaagtgttccagtagccggcagtac
ctgcggtatcgttacaccttggatgagctccctgccatgctacataagctgaaggttcgg
gccaagtcctttgacacctgggctaacaaagtgcgagtggccctagaggtagaggatggc
cggaagcggagctttgaagagctaagggcactggagtctgaggcccgtgaaagaaggttc
cctaacagtgagctgcttcagcgattgacaaactgcctgaatgaagcagaggcttgtgtc
tcccaagtcttgggtctggtcagtggccaagagagtggcccccgctcgattgaaacacca
caactgaccctgactgagctccgggtccttcttgagcagatgggcagcctcccctgtgcc
atgcgtcagatgagggatgttaaggatttcctgcagcaggtggaggactaccaagctgag
gcccgggaagccctggcttcactgccacccagtctggggcaactgcggtccctgttggaa
agggggcagcagctgggtgtggaagtgcctgaagcccgtcagctccagcagcaagtggag
caagcacgatggctagatgaagtaaagcaagcactggacccttcggcccaaaggggctcc
ctggtcatcatgcaggggctgttggttacaggtgccaaagtagcttccagcccttttgtg
gacaaggcccgggctgagcttcaggagctgctgaccattgcagagcgctgggaagaaaag
gctcatttctgcttggaggccaggcagaagcatccactagctacactggaagccataatt
cgtgagacagaaaacatccctgttcacctacctaacatccaggcactcaaagaggctctg
accaaggcacaggcttggattgctgatgtggttgagattcaaaatggtgaccactaccca
tgcttggatgatttggagggcttggtagctgtgggccgggacctaccggtagggctggaa
gagctgaaacagctagagttgcaggtactgacagcacactcctggagagagaaggcttcc
aagatgttcctgaagaagaattcatgctacacattgctggaggtgctttgcccatgtgca
gacactggttcagacaggaccaagcgcagctggtggatggagaaggagatggggttatat
aaatctgatacagagctgctgggactttctgcgaaggacctcagggacccaggctctgtg
attatggccttcaaggagggggaacagaaggagaaggagggaatcctgcagctacgtcac
accaactccgccaagctcagtccatcaactacagcctcctctgcaacctccatctgtgtg
tgtgggcagatgccagccggggtggaagctctgcagtgtgacctatgtcaggactggttc
cacgggcgatgtgtgtcagtaccccgcctcttcagctccctgagacccagtgccacctca
tcaccactgctggcctggtgggagtgggacaccaaattcttgtgtccactgtgcatgcgc
tcacggcgcccacgcctggagaccatcctggcactgctggtagcgctgcagagactgcct
gtgcggctgcctgagggtgaggccctgcagtgcctcacagagagggccatcagctggcaa
ggccgtgccaggcaggctctggcctctgaggatgtgactgctctgttgggacggctggcc
gagcttcgccagcggctgcaggctgaacccaggcccgaggagccccctacctacccttca
gcccctgcctctgaccctctcagagaaggcagtggcaaggatatgcctaaggtccaaggg
ttgctggagaacagagacagtgtaagcagtcctgagaaggtagctgccgggtatgacttg
tataagacagacttggaacagttctcctcagtactgccccagttgattggccccgtattg
gaactgcctgaggcaactagggcccccctggaggagctcatgttggagggggatctcctt
gaggtgactctggatgagaaccacagcatctggcagctgttgcaagctgggcagcctcca
gacctagcacggatccgcacgcttctggagctggagaagcctgagcatcaaggaagtcgg
ataaggggccaggtacttgagaagcgacggcggcggcagcggaaagccgatctgggtaga
aagagtgaacgtattgttcaagaagaggtggagtcaaaaaaggcccggagttcacagatc
aagcctgaggagggccaagaggaagaagagtttgaggagggaacagattgtgaaaataca
ttcatgacacctcctgcagagcataaccctatcttgaaagggaaccaaaataacttagaa
gagaaggattcagctcctacaacaccatttccttctttaacacctttggtacacttgtca
taccctgagcagcaagagttgtga

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