Balaenoptera acutorostrata scammoni (minke whale): 103009925
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Entry
103009925 CDS
T03086
Symbol
COL6A3
Name
(RefSeq) collagen type VI alpha 3 chain
KO
K06238
collagen type VI alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04151
PI3K-Akt signaling pathway
bacu04510
Focal adhesion
bacu04512
ECM-receptor interaction
bacu04518
Integrin signaling
bacu04820
Cytoskeleton in muscle cells
bacu04974
Protein digestion and absorption
bacu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103009925 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103009925 (COL6A3)
04518 Integrin signaling
103009925 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103009925 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103009925 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103009925 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103009925 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bacu04147
]
103009925 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
103009925 (COL6A3)
Exosome [BR:
bacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103009925 (COL6A3)
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103009925 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
103009925 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Extensin_1
DUF4088
Motif
Other DBs
NCBI-GeneID:
103009925
NCBI-ProteinID:
XP_007184961
LinkDB
All DBs
Position
Un
AA seq
3030 aa
AA seq
DB search
MRKHRHLPFVVTFCLFFSGFSFTRAQQQAAQDSADIIFLIDGSNNTGSVNFAVIRDFLVN
LLERLSVGTQQIQVGVVQYSDEPRTMFSLNSYSTKAQVLDAVQALGFIGGELANVGLALD
FVVENHFTRAGGSRVEEGVPQVLVLISAGPSSDEIRDAVIALKQASVFSFGLGAQAASKA
ELQHIATNDNLVFTVPEFRSFGDVQEQLLPYIVGVAQRHIVLQPPTIVTQVIEINKRDIV
FLVDGSSALGLVSFNAIRDFVAKVIQRLEIGQDYIQVAVAQYADTVRPEFYFNTYPTKRE
VMTAVRKMKPMDGSALYTGSALDFVRNNLFTEPAGYRAAEGVPKLLVLITGGKSLDEVSQ
PAQELKRSGIMAFAVGNKAADRAELEEIAFDSSLVFXXXEFRAAPLQGVLPGLLAPLRTL
SGTTEVHVNKRDIIFLLDGSFNVGKTNFPYVRDFVMNVVNSLDVGSDHIRVGLVQFSDTP
VTEFSLNTYQTKPDLLAHVRQLQLKGGLGRNTGAALSYVHDNHFTEAGGSRIRDQVPQLL
LLLTAGQSEDSYLQAANALARAGILTFCVGTSQANKAELEQIAFNPSLVYLMDDFSSLPA
LPQQLIQPLTTYVSGGVEEVPLAQPESKRDILFLFDGSANLVGQFPAVRDFLYKVIDELD
VKPDRTRIAVAQYSDDVRVESRFDEHQNKPEILNLVKRMKIKTGKALNLGYALDYVQRYI
FVKSTGSRVEDGVLQFLVLLVAGRSSDRVDRPALNLKQTGVVPFILQAKNADPAELEQIV
PSPAFILAAESLPKIGDLQPQIVNLLKSVQNGAPTPVSGEKDVVFLIDGSEGVRSGFPLL
KEFVQRVVESLDVGADRVRVAVVQYSDRTRPEFYLNSYMDQQSIVGAIRGMTLLGGPTPN
TGAALDFVLRNILIGSAGSRIAEGVPQLLIVLTADRSGDDVSGPSVVLKRGGAVPIGIGI
GNADITEMQTISLIPDFAVAIPTFRQLGTVQQVISDRVTQLSREELGRLRASLVPVTSPG
VGGKRDVVFLIDGSQSASPEFQYIRTLIERLVDYLDVGFDMTRNAHSSKDEVQNAVRRLR
PKGGRQINIGSALEYVSRNIFKRPLGSRIEEGVPQFLILISSGKSDDEVDESAAELKQFG
VAPLIIARSADQEQLVKISLSPEYVFSVSTFRELPSLEQKLLTPITTLTSEQVQRLLAST
RYPPPAMESDAADIVFLIDSSDSVKPDGIAHIRDFVSRIVRRLNIGPNKVRIGVVQFSND
VFPEFYLKTYKSQASVLDAIRRLRFKGGSPLNTGKALEFVARNFFVKSAGSRIEDGVPQH
LVLFLGGKSQDDVTRYSQVISSSGIVSLGIGDRNIDRMELQTITNDSRLVFTVREFRELP
NIEERVMNSFGPSKVTPAPPGVDTPSPSRPEKKKADIVFLLDGSINFRRDSFQEVLRFVS
EIVDTVYEGGDSIQVGLVQYNSDPTDEFFLKDFSTKEQIIDAINKVVYKGGRHANTKVGL
EHLRLNHFVPEAGSRLDQRVPQIAFVITGGRSVEDAQDVSLALTQRGVKVFAVGVRNIDS
EEVGKVASNSATAFRVGNVQELSELSEQVLETLHDAMHETLCPGVPDVSKVCNLDVILGF
DGSRDQNVFVAQRGFESKMDTILNRISQMQRISCSGSQLPTVRVSVVANTPSGPVEAFDF
AEYQPELFEKFQNMRTEHPYVLTADTLKLYQNKFRQASPDSVKVVIHFTDGVDGDLADLQ
RASEELRQECVRALILVGLERVANLEQLMQLEFGRGFMYNRPLRLNLLDLDYELAEQLDN
IAEKACCGVPCKCSGQRGDRGPIGSIGPKGIPGEDGYRGYPGDEGGPGERGPPGVNGTQG
FQGCPGQRGIKGSPGFPGEKGELGEIGLDGLDGEDGDKGLPGISGEKGNPGRRGDKGPKG
GKGERGDVGIRGDPGNSGQDSQQRGPKGETGDIGPMGLPGADGVSGGPGEPGKSGGFGRR
GPAGAKGNKGGPGQQGSVGEQGTRGAQGPPGLTGPPGLIGEQGIPXXXXXXXXXXIPGPR
GSGGTAGAPGERGRTGPLGRKGEPGDPGPKGSIGNRGPRGETGDDGRDGVGSEGRRGKKG
ERGFPGYPGPKGNPGEPGTDGALGPKGIRGRRGNSGPPGIAGQKGDPGYPGPSGYKGSRG
DSMDQCALVQSIKDKCPCCYGPLECPVFPTELAFALDTSEGVTQDTFSRMRDVVLKVVHD
LTIAESNCPRGARVAVVTYNNEVTTEIRFADSKKKSVLQDKIKNLQVALTSKQQSLETAM
SFVARNTFKRVRNGFLMRKVAVFFSNKPTSESPQLREAVLKLSDAGITPLFLTSQEDRQL
VNALQINNTAVGHALILPASGDLTDFLKNVLTCHVCLDICNIDPSCGFGSWRPSFRDRRA
AGSDVDIDMAFILDSSESTTLFQFNEMRKYIEYLVQQLDVSPDPKASQHFARVAVMQHAP
YEYVGNASVPPVKVEFSLTDYGSKEKLLAFLGSRMTQLQGTRALGSAIDYTIENIFESAP
NPRDLKLVVLMLTGEVQNQQLEEAQRAILQAKCKGYFFVILGIGRKVNVRELYSFASEPN
DVFFKHMDKSTELNEEPLMRFGRLLPSFISSKNAFYLSPDIRKQCDWFQGDQPAKNLVQF
GYKQINVPKNVTSSPTSKPVTTAKPVTTAKPVTNTTKPITVVNLPASKPAAMRPVAETPV
AGRPMATKPEAAKSMATKPEAAKSMATKPEATKPKAAKPLAKPVATKPEVVKPVTTKLVP
TKPEATKPEVAKPMATKPDATKPEVSKTATVRPAVAARPAAAKPAPARPPAAAKPMAAKP
EAPRPQAAKLAATRPATAKPMVKAAREVHASEITGNSAKLHWERPEPPSPYLYNLTITSA
HDQSLVLKQNLTVTDHVIGGLLPGQTYHVTVICYLRSQVRAIYQGSFSTKKIQPPLPQTA
RSASSSTINLVVSAERLAGSKTDICKLPKEEGTCRDFILKWYYDSVTESCARFWYGGCGG
NENRFDSQDECEKVCPPVLIKPGVIAAIGT
NT seq
9093 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcatcggcatttgcctttcgtggtcaccttttgcctttttttctcaggcttt
tcctttactcgtgcacaacaacaagcagcacaagactctgctgacattattttcctaatt
gatggatcaaacaacaccggaagtgtcaattttgcagtcattcgcgacttccttgtaaat
ctccttgagagactctcagttggaactcagcagatccaagtgggggtggtccagtatagc
gatgagcccagaaccatgttctccttaaacagctattccaccaaggctcaggttctggac
gcagtgcaagccctggggttcatcggtggggagttggccaatgtcggccttgcccttgat
tttgtggtggagaatcacttcacccgggcagggggcagccgagtggaggaaggggttccc
caggtgctggtcctcataagtgctgggccttctagtgatgaaatccgagatgcggtcata
gcactgaagcaggctagcgttttctcatttggcctcggagcccaggccgcctccaaggca
gagcttcagcacatagctaccaatgacaacttggtgtttactgtcccggaattccgtagc
tttggggacgtccaggagcaattactgccgtacattgttggcgtggcccaaaggcacatt
gtcttgcaaccgccaaccattgtcacccaagtcattgaaatcaacaagagagacatagtt
ttcctggtggatggctcttctgccctgggactggtcagcttcaatgcaatccgcgacttc
gttgccaaggtcatccagaggctggagatcggacaggattatatccaagtagcagtggct
cagtatgcagacacagtgaggccggagttttatttcaatacctaccccaccaagagggag
gtcatgaccgccgtgaggaaaatgaagcccatggatggctcggccttgtacacaggctct
gctctggactttgttcggaacaacctgttcacggagccggctggctatcgggccgccgag
ggggtccctaagcttttggtgctgattacaggtggtaagtccttagatgaagtcagccag
cctgcccaggagctgaagagaagcggcatcatggcctttgccgtcgggaacaaggcggcc
gaccgggctgagctggaagagatcgctttcgattcctccctggtgttcnnnnnnnntgag
ttccgagccgcccctttgcagggtgtgctgcctggcttgctggcgcctctcaggaccctc
tctggaaccactgaagttcacgtaaacaaaagggatatcatctttcttttggatggatcg
ttcaacgttggaaagaccaatttcccttacgtgcgggactttgtcatgaacgtagttaac
agccttgatgttggaagcgaccatattcgtgtcggtttagtgcaatttagtgacactccg
gtgacggagttctctctaaacacctaccagaccaagccagatttgctagctcatgtgagg
cagctgcagctcaaggggggtttgggccggaacacgggcgcagccctaagctatgtccac
gacaaccacttcaccgaagctggcggcagcaggatccgggaccaggtgccgcaactcctg
ctcctgctcacagccgggcagtctgaggactcctatttgcaagctgccaatgccctagca
cgcgcaggcatcctgaccttttgtgtgggcactagccaggccaataaggcagagcttgag
cagattgcttttaacccaagcctggtgtatctcatggatgatttcagctccctgcctgct
ttgcctcagcagctgattcagcccctaaccacttatgttagtggaggtgtggaggaagtg
ccactcgcccagccagagagcaagcgagacatcctgttcctctttgatggctcagccaat
ctcgtgggccagttccctgctgtccgcgacttcctctacaaggtcattgatgagctggat
gtgaaacctgacaggacccggattgcggtggctcagtacagcgatgatgtcagggtggag
tcccgttttgatgagcaccagaacaagccagagatcctgaatctcgtgaagagaatgaag
atcaagacgggcaaagccctcaacctgggctatgccctggactacgtgcagaggtacatc
tttgtgaagtccactggaagccgggtcgaggacggagtgcttcagttcctggtgctgctg
gtggcgggaaggtcatccgatcgtgtggacaggccagctctcaacctgaaacagactggg
gtggtgcccttcatcctccaggccaagaacgcagaccctgccgagttggagcagatagta
ccatcccccgcctttatcctggctgcggagtcacttcccaagattggagaccttcaacca
cagatcgtaaacctcttaaaatcggtgcaaaatggggcgccaacaccagtttcaggtgaa
aaggatgtggtgtttctgattgacggctccgagggtgtcaggagcggcttcccgctgttg
aaagagtttgtccagagagtggtggagagcctggacgtgggtgcggaccgggtgcgcgta
gctgtggtgcagtacagcgaccggaccaggcccgagttctacctgaattcctacatggac
cagcagagcatcgttggtgccatccgcgggatgaccctgctgggcgggccaacccccaac
accggggccgccctggactttgtcctgaggaacatcctgattggttccgccgggagccgc
atagcggaaggcgtcccccagctcctgattgtcctcacggccgacaggtctggggatgat
gtgagcggcccctcggtggtcctgaagaggggaggggccgtgcccatcggcatcggcatc
gggaacgctgacatcaccgagatgcagaccatctccctcatcccggacttcgcagtggcc
attcccaccttccggcagctggggaccgtccaacaggtcatctccgacagagtgacccag
ctcagccgcgaggagctgggcaggttgagggcatctctggtccctgtaacgagcccgggt
gtcggtggcaagagggatgtggtctttctcatcgatgggtcccaaagcgccagccccgag
tttcagtacatccgtaccctcatcgagaggctggttgactacctggatgtgggcttcgac
atgacccggaatgcccactccagcaaggacgaggtgcagaacgcggtgaggcggctgcgg
cccaaaggcgggaggcagatcaacattgggagcgccctggagtacgtgtcaaggaatatc
ttcaagaggcctctggggagccggattgaagagggtgtccctcagttcttgatcctcatt
tcttccgggaagtctgatgatgaggtagatgaatcagcagcagagctcaagcagtttggc
gtggcgccacttataatcgcaaggagcgcagaccaggagcagttggtgaagatctccctg
agccctgaatacgtgttctcagtgagtaccttccgggagctgcccagcctggagcagaaa
ctgctgacacccatcacaaccctaacctccgagcaggttcagcggctcctggccagcacg
cgctaccctcctccagccatggagagtgatgctgcagacatcgtcttcctaattgacagc
tctgacagcgtgaagccggacggcattgcacacatccgggactttgttagcaggatcgtg
cggagacttaacattggccctaataaagtgagaattggggtcgtgcagttcagcaatgat
gtcttcccagagttttacctgaagacctataaatcccaggccagtgtgctggatgccata
cgtcgcctgaggttcaaagggggctctccgctgaacactggcaaagctctggaattcgtg
gcaaggaatttctttgtcaagtctgccgggagccggatagaagacggggtgccccaacac
ctggttctgtttctgggtggcaaatcccaggacgatgttaccaggtattcccaggtgata
agctcctcggggattgtgagtttagggataggagaccgaaacattgacagaatggagctg
cagaccatcaccaacgactccagactagtcttcacggttcgggagttcagagagctcccc
aacatagaagaaagggtcatgaactcctttggaccctccaaggtcacccctgcacctccg
ggagtggacacgccctctccctcacggccagagaaaaagaaagcagacatcgtgttcctg
ttggatggttccatcaatttccggagggacagtttccaggaagtgctccgtttcgtgtct
gaaattgtggacacggtttatgaagggggagattccatccaagtggggctggtccagtac
aactctgaccccactgatgaattcttcctgaaggacttttccaccaaggagcagattatc
gatgccatcaacaaggtggtctacaaaggggggaggcacgcaaacaccaaggtgggcctg
gagcacctgcggctgaatcacttcgtgccagaggcaggcagccgcctggatcagagagtc
ccacagatcgcctttgtgatcaccggaggaaggtcggtggaggatgcccaggacgtgagc
ctggcactcacccagagaggcgtcaaagtgtttgcggtgggcgtgaggaacatcgactca
gaggaggttgggaaggtcgcgtccaacagtgccacggcgttccgagtggggaacgtccag
gagctgtcggaattgagcgagcaggttttggaaactctgcatgacgcgatgcatgaaacc
ttatgtcctggtgtgcctgatgtttccaaagtctgtaacctggatgtgattctgggcttt
gatggttcaagagatcagaacgtatttgtggctcagaggggctttgagtccaagatggac
accatcctgaatagaatcagccagatgcaaagaatcagctgcagcggcagccagctgccc
acggtgcgggtgtccgtggtggccaacacgccctcaggccccgtggaggcctttgacttc
gctgagtaccagccagagctgtttgagaagttccagaacatgcgcaccgagcacccctac
gtcctcactgcggacacgctgaagctctaccagaacaagttccggcaggcctcgccagac
agtgtgaaggtggtcattcattttactgatggggtggatggagatctggctgatttacaa
agagcttcggaggaactccgacaagaatgcgtccgagctctgatcttggtgggccttgaa
cgtgtcgccaacttggagcagctgatgcaactggagtttgggcgaggattcatgtacaac
cggcccctgagactgaacttgctggacctagactatgaactagcggagcaacttgacaac
attgccgagaaagcctgctgtggggttccctgcaaatgctctggacaaagaggagaccga
gggcccattggcagcattgggccaaagggtattcctggagaagatggctaccgaggttat
cctggtgacgagggtggacctggtgagcgcggcccgcctggtgtgaacggcacgcaaggt
ttccagggctgccccgggcagaggggcataaagggctcacctggattcccaggagagaag
ggtgaattaggagaaattggtctggatggtcttgacggtgaagatggagacaaaggattg
cctggtatttctggagagaaagggaatccaggaagaaggggtgacaaaggacccaaagga
ggcaaaggagaaagaggagatgttgggatcagaggtgacccgggtaactcaggacaggac
agccagcagagaggacccaaaggagaaaccggagacatcggccccatgggtctccctggg
gcagatggggtgtctggagggcctggagaacctgggaaaagcggaggctttggccgaagg
ggaccagcaggagctaagggcaacaagggcggtcccggccagcagggctctgtgggagag
caggggaccagaggtgcacagggtcctcctggtctcaccggtcctccaggcctgatcggt
gaacaaggcattcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattcctggacctcgg
ggaagcggggggaccgcaggtgctcctggagaacgtggcagaaccgggcccctgggaaga
aagggtgagcccggagatccaggacccaagggaagcatcgggaaccggggccctcgtggg
gagacgggagatgacggacgagatggagttggcagtgaaggacgcagaggcaaaaaagga
gaaagaggattccccggatacccaggaccaaagggcaatcctggtgagccggggacagac
ggagcactgggacccaaaggcatcagaggccgaaggggaaattcaggacctccagggata
gctggccagaagggagaccctggttacccagggccatctggttacaaaggcagcagaggt
gactcgatggaccaatgtgccctggtccagagcatcaaagataaatgtccttgctgctac
gggcccctggaatgccccgtcttcccgacggagctggccttcgccttggacacctccgag
ggggtcacccaggacaccttcagccggatgagggatgtggtcctgaaggtcgtgcacgac
ctgaccatcgccgagagcaactgcccgcggggggcccgcgtggccgtggtcacctacaac
aatgaggtcaccacggagatccgctttgctgactccaagaagaagtccgttctccaggac
aagatcaagaacctccaggtggctctgacgtccaagcaacagagcctggaaactgccatg
tccttcgtggccagaaacacgtttaagcgggtgcggaatggattcctgatgaggaaggtg
gctgttttcttcagcaataaacccacgagtgagtccccgcagctcagggaggccgtgctc
aagctctcggatgctgggatcacaccgttgttcctcacgagccaggaggaccggcagctg
gtcaacgccctgcagatcaataacacagcggtgggtcacgcccttatcctaccagctagc
ggagacctcacggacttcttgaagaacgtcctgacttgtcacgtttgcttggacatctgc
aacatcgacccatcctgtggatttggcagctggaggccttccttcagggaccggagagca
gcgggcagtgacgtggatatcgacatggctttcatcttagatagctccgagtccaccact
ctgttccagttcaacgagatgaggaagtacatagagtacctggtccaacagctggacgtg
agcccggaccccaaggcctcccagcactttgccagagtggcggtcatgcagcacgcaccc
tatgagtacgtgggcaacgccagcgtgccgcccgtgaaggtggaattctccctgactgac
tacggctccaaggagaagctcctggccttccttggcagcaggatgacacagctccagggg
accagggctttgggcagtgccatcgactataccatcgagaacatctttgaaagtgcaccc
aacccacgggacctgaagctcgtggtcctgatgctgacgggcgaggtgcagaaccagcag
ctggaggaggcccagagagccatcctgcaggccaaatgcaagggttacttcttcgtgatc
ctgggcattggtaggaaggtgaacgtcagggagctgtacagcttcgccagtgaaccaaac
gacgtcttcttcaaacacatggacaagtctactgagctcaacgaagagcctctgatgcgc
tttgggaggctgttgccatccttcatcagcagtaaaaatgctttttacctgtccccagat
atcaggaaacagtgtgattggttccaaggggaccaaccagcaaagaatcttgtgcagttt
ggttacaaacaaataaatgttcctaaaaatgttacttcaagtcctacatctaaaccagtg
accacagcaaagccagtgaccacagcaaagccagtgaccaacaccaccaaaccaataaca
gtggtaaacctgccggcctcaaagccagctgccatgagacctgtggccgagacacccgtg
gctgggagacccatggccaccaagcctgaggctgccaagtccatggccaccaagcctgag
gctgccaagtccatggccaccaagcctgaggccaccaagcccaaggccgccaagcccttg
gccaagcctgtggccaccaagcccgaggtcgtcaagcctgtgaccaccaagctcgtgccc
accaagcccgaggccaccaaacctgaagttgccaagcccatggccaccaagcctgacgcc
accaagcctgaggtttcgaagacggccacagttagacccgcagtggccgcgaggcccgca
gcagcaaagccggcccctgccagaccccctgctgctgccaaacccatggccgcaaagccc
gaggcccccaggccccaggcagccaaactggccgccaccaggccagccactgctaagccc
atggttaaggcagcccgagaggtccacgcgtctgaaatcacagggaacagcgccaaactc
cactgggagaggcccgagccccccagcccttatttatacaacctgaccatcacctcggcc
cacgatcagtccctggttctgaagcagaacctcacggtcacggaccacgtcatcgggggc
ctgctccctgggcagacgtaccatgtcacggtgatctgttacctaaggtctcaggtcaga
gccatctaccaaggcagtttcagcacaaagaaaattcagcctccacttccacaaacggcg
aggtcagcttctagttcaaccatcaatctagtggtgagcgcagaacggctggctgggagt
aaaacagatatatgtaagttgccaaaagaagaaggaacttgcagggactttatattaaaa
tggtactatgattccgttactgaaagctgcgccagattctggtacggaggttgtggtgga
aatgaaaacagatttgattcgcaggatgaatgtgaaaaggtttgccctcctgtgcttatc
aagcccggagtcattgctgcgattgggacctaa
DBGET
integrated database retrieval system
