Balaenoptera acutorostrata scammoni (minke whale): 103010297
Help
Entry
103010297 CDS
T03086
Symbol
TAF1C
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bacu03021
]
103010297 (TAF1C)
Transcription machinery [BR:
bacu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
103010297 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
DUF4129
Motif
Other DBs
NCBI-GeneID:
103010297
NCBI-ProteinID:
XP_007182693
LinkDB
All DBs
Position
Un
AA seq
784 aa
AA seq
DB search
MDFPSSLPPSLFTTGPLGLSDVPDVSFMCSWRDALTLPESLPQGPENAVPHVAKGLLWEP
DTPGPLPLLPPGPDPWDPGVTAQDLLFRGGYQFRRQPQAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARGRSKKKTVVSVKRLLQDLGGHQPWGCPWAYLSHRQRRFSILGGP
ILSTSVASLLGELLHEELALRWEQLLLDDAFTGGALAWVPGRTPRAGQLVYPAGGALDRL
YFQKVSLTPGSEPRVLGGPGHIRLRGPVRQVVTRTVQGEALLAVRSDYHCALWKVSKQGQ
PAPLQVLQVEKGATGISLSPHLPGELAICSRSGAICLWTPQDGLQQIYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKMVDTQGPPGCGLLLFRGGAEASCQKGERVLLTQYLGE
CGPECLHPTLHLICTQFSLCLVDERLPLVPLLKGASTPRLAGPPQSLPSRSDSLSAFPLL
EPKSQWRLQGGLKAPAIGLAAAIPPSASTPVLSLFQLSAAGDVFHQRLHLQGEPGPDSPA
PTASWTPQATASCSRWLKALLEVPPAPPVWAAPTFSHRRLLGCFEPPKAEGKAPEGLRTA
MAKGRLLQPRDLGLLPXXXXXPAPEPGPEDELSERLEAAWEGQAAAWWERRRGSGSGPGK
QPKRHKRRTQLSSTFSSLSGRLDLSDAASPPPSPERTLPEARPQPPVTPPSQESTQELWA
RGVPSERQQTLRDYMAELPLGGDAPGAASVPSSQASSVRATPSRQRAAVRSGSQPHCKKP
RMGF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctccctccctcgttgtttacgactggcccccttggtctgagc
gatgtccctgacgtgtccttcatgtgcagctggagagacgcgctgaccctgccggagtcc
ctgccccaaggtcctgagaacgcggtgccgcacgtggccaagggcctgctctgggagccg
gacacccctgggccgctgcccttgctgcctcctggtcccgatccctgggaccccggcgtg
actgcccaggatctgcttttccggggaggttaccagttccgtagacagccccaagccgtg
ctggacgttactgagcagctcagccggttcttgtgggaccatggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaagctggagggagcacggggccgctcgaag
aagaagacagtggtcagcgtgaagaggctgctccaggacctcggtggacaccagccctgg
ggctgtccctgggcttacctcagccaccgccagcgccggttctccatccttgggggcccg
atcctcagcacgtcggtggcgagcctcctgggggagctgctgcacgaggagctggccctg
cgctgggagcagctgctcctggacgacgccttcactgggggcgcgctggcctgggtgccc
ggcaggacgcccagggctgggcagctggtctaccccgcaggaggcgccctggacaggctg
tacttccagaaggtcagcctgaccccaggcagtgagccccgggttctcggaggccctggc
catatccggctccggggacctgtccggcaggtggtgacccgcaccgtgcagggagaagct
ctgctggctgtccgctctgactaccactgtgccttgtggaaggtcagtaagcaggggcaa
ccggcccctctccaggtgttgcaggttgagaagggggccacagggatcagcctcagccct
cacctgcctggagagctggccatctgcagccgttccggagccatctgtctgtggactcct
caggacgggctgcagcaaatctacaaggaccccgagacccttgtgttccgggacccctct
ccctggcgttgggcagacttcaccgcccaccctcgagtgctgactgtgggtgatcgcact
ggagtgaagatggtggacactcagggcccgccgggctgtggtctgctgctttttcgtgga
ggggcagaagcatcgtgccagaaaggggagcgggtcctgctcacccagtacctgggggag
tgcggccccgagtgtctgcatcccacgctccacctcatctgcacccagttctcgctctgc
ctggtggatgagcgcctccccttggtgcccctgctgaagggggcctctacaccccggctg
gcagggcccccccagtctctcccttccaggagcgactccctctctgccttccccctgctg
gagcccaagagtcagtggcggctgcagggagggctgaaagcaccagccataggtctggcc
gccgccatcccaccctccgcttccactccggtgctgtcgctcttccaactttcggcggct
ggagacgtcttccaccagcgcctccacctccagggagagcccgggcctgactctcctgcc
cccacggcttcctggaccccccaggccactgcctcctgcagccggtggctgaaggccctg
ctggaggtgcccccggctccccccgtgtgggctgcacccaccttctcccaccgccgcctg
ctgggctgctttgagcctccgaaggcagagggcaaagcgccagagggtcttcgcacggcc
atggccaaagggcgtctcctgcagccgagggacctgggcttgctcccnnnnnnnnnnnnn
nncccggccccggagccaggccccgaggacgagctcagcgagcgtttggaggcagcctgg
gagggccaggcggcggcctggtgggagaggcggcggggcagcggctcggggcccggcaaa
cagcccaagcggcacaagcgccggactcaactgtccagcaccttctcctcactcagcggc
cgcttagacctctcagacgccgccagcccccctcccagcccagagcggacactgcccgag
gccaggcctcagcccccagtgaccccgccctcccaggagtccacccaggagctgtgggcc
cggggcgtcccctcggagcggcagcagaccctccgggactacatggctgagctgccgctc
ggaggggacgccccgggggctgcctctgtgccttcctcccaggcctccagcgtccgggcc
accccctcccggcagcgggcagccgtccgctccggctctcagccgcactgtaagaagccc
cgcatgggcttctga
DBGET
integrated database retrieval system
