Balaenoptera acutorostrata scammoni (minke whale): 103010606
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Entry
103010606 CDS
T03086
Symbol
COL4A4
Name
(RefSeq) collagen type IV alpha 4 chain
KO
K06237
collagen type IV alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04151
PI3K-Akt signaling pathway
bacu04510
Focal adhesion
bacu04512
ECM-receptor interaction
bacu04820
Cytoskeleton in muscle cells
bacu04926
Relaxin signaling pathway
bacu04933
AGE-RAGE signaling pathway in diabetic complications
bacu04974
Protein digestion and absorption
bacu05146
Amoebiasis
bacu05165
Human papillomavirus infection
bacu05200
Pathways in cancer
bacu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103010606 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103010606 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103010606 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103010606 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103010606 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
103010606 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103010606 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
103010606 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103010606 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
103010606 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103010606 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bacu04147
]
103010606 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
103010606 (COL4A4)
Exosome [BR:
bacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103010606 (COL4A4)
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103010606 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103010606
NCBI-ProteinID:
XP_007166789
UniProt:
A0A383YVR2
LinkDB
All DBs
Position
Un
AA seq
1686 aa
AA seq
DB search
MALVRRSFRWIKPLATDSWSLVLILFSVQHAYGGGKKFIGPCGGRDCSLCQCFPEKGSRG
QPGPPGPQGPIGPLGPPGPIGIPGEKGMRGDSGLPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKSGIDGYNGSRGAPGFPGERGALGPQGSPGLLGNKGEKGNSVFILGVIKGI
QGDRGDPGPPGLPGSRGARGPAGPVGYPGESGLAGPPGPPGSPGLKGNPGVGVKGQMGDP
GEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGTPGIIGPPGPPGPKGEPGIGTKGEKGIPG
FPGPRGDPGFYGSPGFPGLKGEPGVFGDPGPFGFLGPKGDPGDHGHPGPPGVLATPALPL
KGPPGDPGHPGRYGESGTVGPPGPPGPPGRPGEVCAGMMGPPGPRGFSGHPGFPGAAGVP
GRADSAPGKPGNQGPPGLPGAPGLPGTPGSDVVYCSAGPPGPQGIKGKVGPPGRRGSKGE
KGSTGLCACQPCPSGPPGPPGLPGRQGSKGDLGLPGRLGEKGYPGLPGARGSPGPPGKPG
TSGPPGSKGEKGDLVVSRVKGHKGQRGPDGPPGFPGQQGQHGQDGYAGEKGDPGPLGDQE
DAAPGDKGPPGPPGPPGRAGPRGPPGLGFPGPPGDRGQPGAPGCPGKRGPDGWKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGFPGRRGAPGLRCLDGEKGQRGKPGISEIPGPPGFHG
DMGDPGFGGEKGSSLVGPPGSPGSPGVNGQKGPPGDSAIGYPGPPGKRGLLGVPGSKGLR
GDPGRPGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGRPGPPGLPGAP
GSRGAPGWKGQQGDMGPPGPAGMKGLPGVPGQPGADGPPGPPGVPGPVGDDALPGLPGPK
GPQGLPGFLGFPGERGKPGPDGHPGRKGEPGEKGWPGSLGDRGAKGDKGARGPPGYEGEM
DIISKKGETGEPGPPGDGGFPGEEGDKGHPGIQGKKGEPGSCGPPGFHRGEPGRNGQPGL
PGPPGPPGSPGLRGLIGFPGFPGDQGEPGSPGPHGLSGLDGTRGPKGYKGEPASQFGLPG
PKGEPGSPGYPGHLGAPGEQGLPGVQGPGGPPGRPGPPGSSGPAGCPGNPGLPGLQGYPG
EIGDPGPRGLMGDAGAPGLPGIKGPSGSPGLNGLHGLKGQKGSRGTSGSHETGPPGPVGM
PGPKGETGDPGSPGISPPGLFGDKGPPGPPGRPGPPGPAGAPGRAVKGDVPDPGLPGDQG
PPGPDGPRGIPGPPGLPGIVDLLKGEPGDCGLPGPPGPPGPPGPPGCKGFPGCDGKDGQK
GPMGFPGLQGPPGTPGPPGEKGLPGPPGRQGPSGPPGSRGEPGPPADLDACPRIPGLPGV
PGPRGPEGAMGIPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGRKGDMGEAGCPGVP
GPPGPVGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKAHN
QDLGLAGSCLRMFSTLPFAHCNVHHVCQYARRNDRSYWLASTAPLPMTPLAEEEIRPYIS
RCAVCEAPAQAVAVHSQDQTIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDVQFSSAPSPDTLKESQAQRQKISRCQ
VCVKHS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtaaggcgctctttcaggtggatcaagcccttggccacagattcctggtcg
ctcgtacttattctcttttctgtacaacatgcgtacgggggtggaaagaagtttattggt
ccctgcggaggaagagattgctctctttgccagtgctttcctgaaaaggggtctcggggt
caaccaggaccaccagggccacagggtcctattggacccctggggccaccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagtggccttcctggagcagcaggtgac
aagggtgataagggtccaactggtgttcctggattcccaggtttggatgggatacctggg
cacccagggcctcctggatccagaggcaaatctggcatagatggctacaatggctcaaga
ggtgctccagggtttccaggagaaagaggagctcttggcccacaaggctccccaggactt
cttgggaacaaaggagaaaaaggaaattcagtgttcattttaggtgtcattaaaggtatt
cagggtgacagaggggacccaggacctcccggcttaccaggctcaaggggagcgagaggg
ccagcaggcccagtgggatatccgggagagtcagggttagcaggacctccaggccctcct
gggagtccaggtttgaagggtaatcctggcgtgggcgtaaaggggcaaatgggagacccg
ggtgaggttggccaacagggttctccaggacccacccttctggtgcagccacctgattct
ggtctctataaaggagaaaagggtattaaaggaacgcctggaatcattggacctcccgga
ccaccaggacccaagggggaacccggtattgggacaaaaggagagaaaggtattcctggg
tttccaggacctcggggggaccctggcttctatggatctccaggttttccaggattaaag
ggcgaaccaggagtgtttggagatcctgggccgtttggatttcttggtccaaagggagat
cctggagaccacgggcacccaggaccaccaggggttttggcaactccagctcttccactc
aaagggcctccaggggatccagggcaccctggccgctatggagaatcggggactgttgga
ccaccaggtccccctggtccccctggtagaccaggggaagtctgtgcaggcatgatggga
ccccctgggccacgagggttttctggtcatccaggatttccaggggcagctggtgttcct
gggagagctgattctgctccaggaaaaccaggcaaccagggaccacctggcttgcctgga
gcgccaggattgccgggaactccaggatcagatgttgtatattgtagtgctgggcctcct
ggaccacaaggaataaaaggcaaagtgggtcctccaggaagaagaggctcaaaaggagaa
aaaggaagcacagggctctgtgcctgccagccttgtccctcaggcccacctggccctcca
ggacttcctgggaggcaagggagtaaaggagacttgggactccctgggcggcttggagaa
aaaggttacccaggccttcctggtgccagaggatctccaggaccaccaggaaaacctggt
acctcaggaccacctggcagcaaaggagaaaaaggtgacctggttgtatcaagagtgaaa
gggcacaaaggacaaagaggtcctgatgggcccccaggatttccagggcagcagggacaa
cacggtcaagatggatatgctggagaaaaaggggacccaggaccactgggagatcaagaa
gatgcagccccaggtgataaagggcctcctggaccaccaggccccccgggcagagcagga
cctagggggcctccaggactgggatttcctggtccaccaggagacagggggcaaccagga
gctccgggctgtccaggcaagaggggccctgatggctggaagggtcagaaaggtgataca
attccttgtaacgtaacctaccctgggaggccaggcccgccaggttttgatggacctcca
ggtccgaagggatttccaggtcgtcggggagctcctgggttgaggtgtttggatggggaa
aagggtcaacgtggcaaaccaggaatctcagaaatccctggtccacctggttttcatggt
gatatgggagatccaggttttggaggtgaaaaggggtcctcccttgtcgggcccccaggc
tctccaggttcacctggagtgaatggtcagaaaggacctccgggagactctgctattggc
tacccaggacccccaggaaagaggggtcttttaggagtaccagggtcaaaaggactcaga
ggtgatcccggacgaccgggggctgcagggccagctggcatgcccggattcccgggtctc
aaaggtcccaaagggagagagggaagtgccgggtttccagggatcccaggtccacccggc
cattcctgtgaaagaggcgctccagggagaccagggccaccagggctccctggagctcca
ggaagtcgaggtgccccaggttggaaaggacaacaaggggacatggggcctcctggaccc
gctggaatgaagggcctccccggagtcccaggacagccaggggcagatggacccccaggg
cccccgggagtcccaggccccgttggggatgatgcgctacctggtcttccaggcccaaag
ggaccccaggggctgcccggcttcctgggttttccgggagagagaggaaaacctggccca
gacggacaccctggcagaaagggagaacccggagaaaagggttggcccggctccctggga
gaccgaggagcgaaaggtgacaaaggagcaagaggacccccaggatatgaaggagaaatg
gatattatttctaaaaagggggaaaccggggaacctggacctcctggagatggtggattc
ccaggagaagaaggtgataaaggccatcctgggatacaaggcaagaaaggagagccggga
agctgtggaccacctggatttcacagaggggagcccgggaggaatgggcagccaggcctt
cctggacccccaggccctccaggctcacctgggctgagagggctcattggctttccggga
tttccaggtgaccagggtgagccaggttctccagggccccatggactttcaggacttgat
ggtacaagaggacctaaagggtacaaaggggaacctgcaagtcagtttggcctacctggt
ccaaagggtgagccagggagccctggatatccaggacatttgggagcacctggagagcag
ggcttgcccggtgttcaaggacctggaggaccgcccggaaggccaggaccgcctggctcc
tctggaccagcggggtgtccaggtaatccagggctgcctgggctgcagggatatccagga
gaaatcggagatcctgggccaagaggcctcatgggggatgcaggggcaccaggtcttccg
ggaataaaaggtccctccgggtcacccggcctgaacggcttgcacggtttaaagggtcag
aaaggcagcagaggcacttcaggttcccatgaaacgggcccacctggtccagtgggaatg
cctgggccaaaaggcgagacaggagaccccgggagcccaggaatttctcctccaggactt
ttcggagacaaaggtcccccaggtcccccagggagacctggaccgcctggtcctgcaggt
gccccaggaagagctgttaagggtgacgttccggacccgggtctgcctggagatcaggga
cctcctggccccgatggtccaagaggaatacccgggcctccagggctccctgggattgtt
gaccttctgaaaggtgaaccaggtgactgtggtctgccggggcctccaggtcccccaggc
ccaccaggccctccaggatgcaaaggcttcccaggatgtgatggaaaagatggccagaaa
ggaccaatgggattcccggggctgcaggggccacctggaactcctgggccgcctggagag
aagggtttacctggacctccaggcagacaggggccctcgggtcctccaggttccagaggt
gaacctgggccccctgcagacttggatgcttgcccccgaatcccggggcttcctggggta
ccaggcccaagaggaccagaaggagccatggggatccctggaatgagaggccccccagga
ccagggtgcaaaggagagcccgggctggatggcaggagaggcgaggatggccttccaggg
tcccctgggcctccgggacgcaaaggtgacatgggagaagcgggctgcccaggagtacca
ggccctcctgggcccgtgggggatcctgggcccaaagggtttggccctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgccccgcgggcatg
cccaggctctggaccgggtatagcctgttatacctggaaggacaggagaaagctcacaat
caagaccttggtctggcgggctcctgcctccgcatgttcagcacgctgcccttcgcccac
tgcaacgtccaccacgtgtgccagtacgcccggaggaacgacaggtcctactggctggcg
agcaccgcgccgttgcccatgacgccgctcgcggaggaggagatccgcccgtacatcagc
cgctgcgccgtgtgcgaggcccccgcgcaagccgtggccgtgcacagtcaggaccagacc
atcccgccgtgtccgcgggcctggcggagcctctggattgggtactctttcctgatgcac
acaggcgctggggaccaaggaggcggccaggccctcatgtcacccggcagctgcctggag
gatttcagagctgcaccgttccttgaatgccaaggacggcagggaacttgccactttttt
gcaaatgagtatagcttctggctgacaactgtgagacctgacgtgcagttttcctccgca
ccctcaccggacaccttgaaagaaagccaagcccagcgccagaaaatcagcaggtgtcag
gtctgtgtgaagcatagctag
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integrated database retrieval system
